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blit: Bioinformatics Library for Integrated Tools

An all-encompassing R toolkit designed to streamline the process of calling various bioinformatics software and then performing data analysis and visualization in R. With 'blit', users can easily integrate a wide array of bioinformatics command line tools into their workflows, leveraging the power of R for sophisticated data manipulation and graphical representation.

Version: 0.1.0
Imports: cli, data.table, R6, rlang (≥ 1.1.0), sys, utils, withr
Suggests: testthat (≥ 3.0.0)
Published: 2025-02-27
DOI: 10.32614/CRAN.package.blit
Author: Yun Peng ORCID iD [aut, cre], Shixiang Wang ORCID iD [aut], Jennifer Lu [cph] (Author of the included scripts from Kraken2 and KrakenTools libraries), Li Song [cph] (Author of included scripts from TRUST4 library), X. Shirley Liu [cph] (Author of included scripts from TRUST4 library)
Maintainer: Yun Peng <yunyunp96 at 163.com>
BugReports: https://github.com/WangLabCSU/blit/issues
License: GPL (≥ 3)
URL: https://github.com/WangLabCSU/blit
NeedsCompilation: no
SystemRequirements: Unix System
Materials: README NEWS
CRAN checks: blit results

Documentation:

Reference manual: blit.pdf

Downloads:

Package source: blit_0.1.0.tar.gz
Windows binaries: r-devel: blit_0.1.0.zip, r-release: blit_0.1.0.zip, r-oldrel: blit_0.1.0.zip
macOS binaries: r-devel (arm64): blit_0.1.0.tgz, r-release (arm64): blit_0.1.0.tgz, r-oldrel (arm64): blit_0.1.0.tgz, r-devel (x86_64): blit_0.1.0.tgz, r-release (x86_64): blit_0.1.0.tgz, r-oldrel (x86_64): blit_0.1.0.tgz

Linking:

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These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.
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