biomod2: Ensemble Platform for Species Distribution Modeling
Functions for species distribution modelling, to calibrate, evaluate, and project species-environment relationships across space and time using multiple modelling algorithms and ensemble forecasting. It accommodates diverse ecological data types (presence-only, presence-absence, counts, multi-class abundance, or relative/absolute abundance) within a unified modelling workflow which includes cross-validation schemes, pseudo-absence selection strategies, expanded model parametrization options, a dozen of algorithms, and tools for exploring and visualizing outputs.
| Version: | 4.3-4-7 |
| Depends: | R (≥ 4.1) |
| Imports: | stats, utils, methods, terra (≥ 1.6-33), sp, reshape, reshape2, abind, foreach, ggplot2, gbm (≥ 2.1.3), rpart, MASS, pROC (≥ 1.15.0), PresenceAbsence, dplyr, rlang, scales |
| Suggests: | Hmisc, gam, mgcv, earth, maxnet, mda, nnet, randomForest, xgboost (≥ 3.1.3.1), cito, torch, car, caret, dismo, ENMeval, doParallel, raster, ggpubr, testthat, knitr, markdown, rmarkdown, tidyterra, ggtext, patchwork, kableExtra, DT, R.utils, paletteer, viridis |
| Published: | 2026-10-08 |
| DOI: | 10.32614/CRAN.package.biomod2 |
| Author: | Maya Guéguen 
[aut, cre],
Hélène Blancheteau [aut],
Rémi Lemaire-Patin [aut],
Wilfried Thuiller
[aut] |
| Maintainer: | Maya Guéguen <maya.gueguen at univ-grenoble-alpes.fr> |
| BugReports: | https://github.com/biomodhub/biomod2/issues |
| License: | GPL-3 |
| URL: | https://biomodhub.github.io/biomod2/ |
| NeedsCompilation: | no |
| Citation: | biomod2 citation info |
| Materials: | README |
| CRAN checks: | biomod2 results |
Documentation:
| Reference manual: | biomod2.html , biomod2.pdf |
| Vignettes: |
Main functions: abundance data (source) Main functions: binary data (source) Auxiliary functions (source) News (source) Videos - ENM 2020 (source) Videos - biomod2 (source) Cross-validation (source) Data preparation (source) Modeling Options (source) Presentation (source) Pseudo-absences (source) Variability in results (source) |
Downloads:
| Package source: | biomod2_4.3-4-7.tar.gz |
| Windows binaries: | r-devel: biomod2_4.3-4-6.zip, r-release: biomod2_4.3-4-6.zip, r-oldrel: biomod2_4.3-4-7.zip |
| macOS binaries: | r-release (arm64): biomod2_4.3-4-7.tgz, r-oldrel (arm64): biomod2_4.3-4-7.tgz, r-release (x86_64): biomod2_4.3-4-7.tgz, r-oldrel (x86_64): biomod2_4.3-4-7.tgz |
| Old sources: | biomod2 archive |
Reverse dependencies:
| Reverse imports: | ecospat, gecko, RRgeo |
| Reverse suggests: | blockCV, caretSDM |
Linking:
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