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Efficiently access the 'Bedrock Bio' library of open-access computational biology datasets. Lazily query datasets backed by 'DuckDB' and 'Apache Iceberg', with support for predicate pushdown and column projection to the cloud storage backend. This enables quick, iterative access to otherwise massive, unwieldy datasets without downloading them in full. See <https://bedrock.bio> for available datasets and documentation.
| Version: | 1.3.0 |
| Depends: | R (≥ 4.1) |
| Imports: | curl, DBI, dbplyr, dplyr, duckdb, jsonlite |
| Suggests: | testthat (≥ 3.0.0) |
| OS_type: | unix |
| Published: | 2026-04-28 |
| DOI: | 10.32614/CRAN.package.bedrockbio |
| Author: | Liam Abbott [aut, cre, cph] |
| Maintainer: | Liam Abbott <liam at bedrock.bio> |
| BugReports: | https://github.com/bedrock-bio/bedrock-bio-client/issues |
| License: | GPL (≥ 3) |
| URL: | https://bedrock.bio, https://github.com/bedrock-bio/bedrock-bio-client |
| NeedsCompilation: | no |
| Language: | en-US |
| Materials: | README, NEWS |
| CRAN checks: | bedrockbio results |
| Reference manual: | bedrockbio.html , bedrockbio.pdf |
| Package source: | bedrockbio_1.3.0.tar.gz |
| Windows binaries: | r-devel: not available, r-release: not available, r-oldrel: not available |
| macOS binaries: | r-release (arm64): bedrockbio_1.3.0.tgz, r-oldrel (arm64): bedrockbio_1.3.0.tgz, r-release (x86_64): not available, r-oldrel (x86_64): not available |
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These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.
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