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Implementation of No-Effect-Concentration estimation that uses 'brms' (see Burkner (2017)<doi:10.18637/jss.v080.i01>; Burkner (2018)<doi:10.32614/RJ-2018-017>; Carpenter 'et al.' (2017)<doi:10.18637/jss.v076.i01> to fit concentration(dose)-response data using Bayesian methods for the purpose of estimating 'ECx' values, but more particularly 'NEC' (see Fox (2010)<doi:10.1016/j.ecoenv.2009.09.012>), 'NSEC' (see Fisher and Fox (2023)<doi:10.1002/etc.5610>), and 'N(S)EC (see Fisher et al. 2023<doi:10.1002/ieam.4809>). This package expands and supersedes an original version implemented in R2jags, see Fisher, Ricardo and Fox (2020)<doi:10.5281/ZENODO.3966864>.
Version: | 2.1.2.0 |
Depends: | R (≥ 4.1), brms, ggplot2 |
Imports: | formula.tools, loo, dplyr, tidyr, purrr, tibble, tidyselect, evaluate, rlang, chk (≥ 0.7.0) |
Suggests: | rstan, knitr, rmarkdown, testthat (≥ 3.0.0) |
Published: | 2024-03-28 |
Author: | Rebecca Fisher [aut, cre], Diego Barneche [aut], Gerard Ricardo [aut], David Fox [aut] |
Maintainer: | Rebecca Fisher <r.fisher at aims.gov.au> |
BugReports: | https://github.com/open-aims/bayesnec/issues |
License: | GPL-2 |
URL: | https://open-aims.github.io/bayesnec/ |
NeedsCompilation: | no |
Materials: | README NEWS |
In views: | Pharmacokinetics |
CRAN checks: | bayesnec results |
Reference manual: | bayesnec.pdf |
Vignettes: |
Single model usage Multi model usage Model details Priors Comparing posterior predictions Running 'bayesnec' |
Package source: | bayesnec_2.1.2.0.tar.gz |
Windows binaries: | r-devel: bayesnec_2.1.2.0.zip, r-release: bayesnec_2.1.2.0.zip, r-oldrel: bayesnec_2.1.2.0.zip |
macOS binaries: | r-release (arm64): bayesnec_2.1.2.0.tgz, r-oldrel (arm64): bayesnec_2.1.2.0.tgz, r-release (x86_64): bayesnec_2.1.2.0.tgz, r-oldrel (x86_64): bayesnec_2.1.2.0.tgz |
Old sources: | bayesnec archive |
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These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.
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