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DEPRECATED. Do not start building new projects based on this package. (The (in-house) APD file format was initially developed to store Affymetrix probe-level data, e.g. normalized CEL intensities. Chip types can be added to APD file and similar to methods in the affxparser package, this package provides methods to read APDs organized by units (probesets). In addition, the probe elements can be arranged optimally such that the elements are guaranteed to be read in order when, for instance, data is read unit by unit. This speeds up the read substantially. This package is supporting the Aroma framework and should not be used elsewhere.)
| Version: | 0.7.0 |
| Depends: | R (≥ 3.0.0) |
| Imports: | R.methodsS3 (≥ 1.7.1), R.oo (≥ 1.23.0), R.utils (≥ 2.2.0), R.huge (≥ 0.9.0) |
| Suggests: | affxparser |
| Published: | 2023-06-23 |
| DOI: | 10.32614/CRAN.package.aroma.apd |
| Author: | Henrik Bengtsson [aut, cre, cph] |
| Maintainer: | Henrik Bengtsson <henrikb at braju.com> |
| BugReports: | https://github.com/HenrikBengtsson/aroma.apd/issues |
| License: | LGPL-2.1 | LGPL-3 [expanded from: LGPL (≥ 2.1)] |
| URL: | URL: https://www.aroma-project.org/, https://github.com/HenrikBengtsson/aroma.apd |
| NeedsCompilation: | no |
| Materials: | README NEWS |
| CRAN checks: | aroma.apd results |
| Reference manual: | aroma.apd.pdf |
| Package source: | aroma.apd_0.7.0.tar.gz |
| Windows binaries: | r-devel: aroma.apd_0.7.0.zip, r-release: aroma.apd_0.7.0.zip, r-oldrel: aroma.apd_0.7.0.zip |
| macOS binaries: | r-release (arm64): aroma.apd_0.7.0.tgz, r-oldrel (arm64): aroma.apd_0.7.0.tgz, r-release (x86_64): aroma.apd_0.7.0.tgz, r-oldrel (x86_64): aroma.apd_0.7.0.tgz |
| Old sources: | aroma.apd archive |
| Reverse imports: | aroma.affymetrix |
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These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.
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