The hardware and bandwidth for this mirror is donated by dogado GmbH, the Webhosting and Full Service-Cloud Provider. Check out our Wordpress Tutorial.
If you wish to report a bug, or if you are interested in having us mirror your free-software or open-source project, please feel free to contact us at mirror[@]dogado.de.

agriDQ

agriDQ provides a comprehensive pipeline for data quality checks and statistical assumption diagnostics in agricultural experimental data.

Installation

# From CRAN
install.packages("agriDQ")

Functions

Category Functions
Outlier detection IQR fence, Z-score, modified Z-score (Hampel), Grubbs, Dixon Q-test
Missing data Little’s MCAR test, MAR/MNAR pattern analysis
Normality Shapiro-Wilk, Anderson-Darling, Lilliefors, Jarque-Bera, KS, Pearson
Homogeneity Bartlett, Levene, Fligner-Killeen
Independence Durbin-Watson, Breusch-Godfrey, Wald-Wolfowitz runs test
Design check CRD, RCBD, LSD, factorial design validation
Qualitative Consistency checks for categorical variables
Report Automated HTML report generation

Quick start

library(agriDQ)

# Load example data
data(agri_trial)

# Full pipeline
result <- run_agriDQ_pipeline(agri_trial,
                               response = "yield",
                               treatment = "treatment",
                               block = "block")
print(result)

# HTML report
generate_agriDQ_report(result, output_file = "report.html")

References

Gomez, K.A. and Gomez, A.A. (1984). Statistical Procedures for Agricultural Research, 2nd ed. Wiley. ISBN: 978-0471870920.

Montgomery, D.C. (2017). Design and Analysis of Experiments, 9th ed. Wiley. ISBN: 978-1119492443.

License

GPL (>= 3)

These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.
Health stats visible at Monitor.