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acoRn an open-source R package designed
for exclusion-based parentage assignment. Utilizing the principles of
Mendelian segregation, acoRn analyzes multilocus genotype
data from potential parents and offspring to identify likely parentage
relationships, while accommodating genotyping errors, missing data, and
duplicate genotypes.
acoRn can be easily installed through GitHub as
follows:
# install.packages("remotes")
library(remotes)
install_github("npechl/acoRn")# load acoRn
library(acoRn)
# create mock parents dataset
parents <- create_mock_parents()
# create mock progeny dataset
offspring <- create_mock_progeny(p[[1]], fparents = 5, mparents = 5, prog = 5)# load acoRn
library(acoRn)
# example datasets
data("parents")
data("offspring")
# run acoRn
r <- acoRn(parents, offspring)
head(r)These binaries (installable software) and packages are in development.
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