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abba: Batch Execution of R Programs on 'Kubernetes', 'SLURM', and 'Posit Workbench'

Submit and monitor batch execution of R programs across distributed computing backends including 'Kubernetes', 'SLURM', and 'Posit Workbench'. Provides end-user job submission functions, cluster interface functions using 'kubectl' and 'SLURM' commands, and a 'plumber' API template for secure identity segregation. Supports parallel and sequential batch execution, file-based caching to skip unchanged programs, and 'logrx' integration for execution logging.

Version: 0.2.0
Imports: yaml, uuid, stringr, httr2, magrittr, tools, rstudioapi, digest, tidyr
Suggests: testthat (≥ 3.0.0), mockery, knitr, rmarkdown, logrx
Published: 2026-04-28
DOI: 10.32614/CRAN.package.abba
Author: Eli Miller ORCID iD [aut], Mike Stackhouse ORCID iD [aut, cre], Ross Didenko [aut], Yevhenii Boiko [aut], Atorus Research, Inc. [cph]
Maintainer: Mike Stackhouse <mike.stackhouse at atorusresearch.com>
BugReports: https://github.com/atorus-research/abba/issues
License: Apache License (≥ 2)
URL: https://atorus-research.github.io/abba/, https://github.com/atorus-research/abba
NeedsCompilation: no
SystemRequirements: kubectl (optional, for Kubernetes backend), SLURM (optional, sbatch/scontrol/sacct/squeue for SLURM backend), Posit Workbench (optional, for Workbench backend)
Materials: README, NEWS
CRAN checks: abba results

Documentation:

Reference manual: abba.html , abba.pdf
Vignettes: abba Options (source, R code)
Kubernetes API Setup (source, R code)
Kubernetes Batch Jobs (source, R code)
Kubernetes Job Submission (source, R code)
SLURM Job Submission (source, R code)
Workbench Batch Jobs (source, R code)
Workbench Job Submission (source, R code)

Downloads:

Package source: abba_0.2.0.tar.gz
Windows binaries: r-devel: abba_0.2.0.zip, r-release: abba_0.2.0.zip, r-oldrel: abba_0.2.0.zip
macOS binaries: r-release (arm64): abba_0.2.0.tgz, r-oldrel (arm64): abba_0.2.0.tgz, r-release (x86_64): not available, r-oldrel (x86_64): not available

Linking:

Please use the canonical form https://CRAN.R-project.org/package=abba to link to this page.

These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.
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