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ZINB.GP: Bayesian Zero-Inflated Negative Binomial Gaussian Process Models

Fits Bayesian zero-inflated negative binomial regression models with Gaussian process random effects for spatial, temporal, or spatiotemporal count data. Provides Markov chain Monte Carlo sampling, configurable random effects in the zero-inflation and count components, and posterior predictive draws. Implements a full GP version of the methods described by He and Huang (2024) <doi:10.1016/j.jspi.2023.106098>.

Version: 1.0.0
Imports: BayesLogit, LaplacesDemon, MASS, Matrix, msm, mvtnorm, stats
Suggests: coda, knitr, posterior, rmarkdown, testthat (≥ 3.0.0)
Published: 2026-09-14
DOI: 10.32614/CRAN.package.ZINB.GP
Author: Mahlon Scott [aut], Qing He [aut], Hsin-Hsiung Huang ORCID iD [aut, cre, cph]
Maintainer: Hsin-Hsiung Huang <hsin.huang at ucf.edu>
BugReports: https://github.com/KingJMS1/GP_ZINB_R/issues
License: MIT + file LICENSE
Copyright: see file COPYRIGHTS
URL: https://github.com/KingJMS1/GP_ZINB_R, https://kingjms1.github.io/GP_ZINB_R/
NeedsCompilation: no
Materials: README, NEWS
CRAN checks: ZINB.GP results

Documentation:

Reference manual: ZINB.GP.html , ZINB.GP.pdf
Vignettes: Oregon Landslides: A Spatiotemporal ZINB-GP Case Study (source, R code)
Simulating and Fitting a Spatiotemporal ZINB-GP Model (source, R code)

Downloads:

Package source: ZINB.GP_1.0.0.tar.gz
Windows binaries: r-devel: ZINB.GP_1.0.0.zip, r-release: ZINB.GP_1.0.0.zip, r-oldrel: ZINB.GP_1.0.0.zip
macOS binaries: r-release (arm64): ZINB.GP_1.0.0.tgz, r-oldrel (arm64): ZINB.GP_1.0.0.tgz, r-release (x86_64): ZINB.GP_1.0.0.tgz, r-oldrel (x86_64): ZINB.GP_1.0.0.tgz

Linking:

Please use the canonical form https://CRAN.R-project.org/package=ZINB.GP to link to this page.

These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.
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