The hardware and bandwidth for this mirror is donated by dogado GmbH, the Webhosting and Full Service-Cloud Provider. Check out our Wordpress Tutorial.
If you wish to report a bug, or if you are interested in having us mirror your free-software or open-source project, please feel free to contact us at mirror[@]dogado.de.

WormTensor: A Clustering Method for Time-Series Whole-Brain Activity Data of 'C. elegans'

A toolkit to detect clusters from distance matrices. The distance matrices are assumed to be calculated between the cells of multiple animals ('Caenorhabditis elegans') from input time-series matrices. Some functions for generating distance matrices, performing clustering, evaluating the clustering, and visualizing the results of clustering and evaluation are available. We're also providing the download function to retrieve the calculated distance matrices from 'figshare' <https://figshare.com>.

Version: 0.1.1
Depends: R (≥ 4.1.0)
Imports: rTensor, usedist, dtwclust, clusterSim, clValid, aricode, cluster, ggplot2, Rtsne, uwot, factoextra, ggrepel, cowplot, methods
Suggests: knitr, rmarkdown, testthat (≥ 3.0.0)
Published: 2024-07-23
DOI: 10.32614/CRAN.package.WormTensor
Author: Kentaro Yamamoto [aut, cre], Koki Tsuyuzaki [aut], Itoshi Nikaido [aut]
Maintainer: Kentaro Yamamoto <yamaken37.the.answer at gmail.com>
BugReports: https://github.com/rikenbit/WormTensor/issues
License: MIT + file LICENSE
URL: https://github.com/rikenbit/WormTensor
NeedsCompilation: no
Materials: NEWS
CRAN checks: WormTensor results

Documentation:

Reference manual: WormTensor.pdf
Vignettes: WormTensor

Downloads:

Package source: WormTensor_0.1.1.tar.gz
Windows binaries: r-devel: WormTensor_0.1.1.zip, r-release: WormTensor_0.1.1.zip, r-oldrel: WormTensor_0.1.1.zip
macOS binaries: r-release (arm64): WormTensor_0.1.1.tgz, r-oldrel (arm64): WormTensor_0.1.1.tgz, r-release (x86_64): WormTensor_0.1.1.tgz, r-oldrel (x86_64): WormTensor_0.1.1.tgz
Old sources: WormTensor archive

Linking:

Please use the canonical form https://CRAN.R-project.org/package=WormTensor to link to this page.

These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.
Health stats visible at Monitor.