The hardware and bandwidth for this mirror is donated by dogado GmbH, the Webhosting and Full Service-Cloud Provider. Check out our Wordpress Tutorial.
If you wish to report a bug, or if you are interested in having us mirror your free-software or open-source project, please feel free to contact us at mirror[@]dogado.de.

VDJgermlines: Variable, Diversity and Joining Sequences from Various Species

Contains variable, diversity, and joining sequences and accompanying functions that enable both the extraction of and comparison between immune V-D-J genomic segments from a variety of species. Sources include IMGT from MP Lefranc (2009) <doi:10.1093/nar/gkn838> and Vgenerepertoire from publication DN Olivieri (2014) <doi:10.1007/s00251-014-0784-3>.

Version: 0.1
Depends: R (≥ 3.1.0), ape, stringdist
Suggests: knitr, rmarkdown
Published: 2018-12-18
DOI: 10.32614/CRAN.package.VDJgermlines
Author: Alexander Yermanos
Maintainer: Alexander Yermanos <ayermanos at gmail.com>
License: GPL-2
NeedsCompilation: no
CRAN checks: VDJgermlines results

Documentation:

Reference manual: VDJgermlines.pdf

Downloads:

Package source: VDJgermlines_0.1.tar.gz
Windows binaries: r-devel: VDJgermlines_0.1.zip, r-release: VDJgermlines_0.1.zip, r-oldrel: VDJgermlines_0.1.zip
macOS binaries: r-release (arm64): VDJgermlines_0.1.tgz, r-oldrel (arm64): VDJgermlines_0.1.tgz, r-release (x86_64): VDJgermlines_0.1.tgz, r-oldrel (x86_64): VDJgermlines_0.1.tgz

Linking:

Please use the canonical form https://CRAN.R-project.org/package=VDJgermlines to link to this page.

These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.
Health stats visible at Monitor.