The hardware and bandwidth for this mirror is donated by dogado GmbH, the Webhosting and Full Service-Cloud Provider. Check out our Wordpress Tutorial.
If you wish to report a bug, or if you are interested in having us mirror your free-software or open-source project, please feel free to contact us at mirror[@]dogado.de.
Assists performing tip-dating of phylogenetic trees with BEAST BEAST is a popular software for phylogenetic analysis. The package assists the implementation of various phylogenetic tip- dating tests using BEAST. It contains two main functions. The first one allows preparing date randomization analyses, which assess the temporal signal of a data set. The second function allows performing leave-one-out analyses, which test for the consistency between independent calibration sequences and allow pinpointing those leading to potential bias. The included tutorial provides detailed step-by-step instructions. An expanded description of the package can be found in article: Rieux, A. and Khatchikian, C.E. (2017), TIPDATINGBEAST: an R package to assist the implementation of phylogenetic tip-dating tests using BEAST. Molecular Ecology Resources, 17: 608-613. <onlinelibrary.wiley.com/doi/full/10.1111/1755-0998.12603>.
| Version: | 1.1-0 |
| Depends: | R (≥ 3.1.2) |
| Imports: | mclust, TeachingDemos, DescTools, utils, stats |
| Published: | 2019-10-22 |
| DOI: | 10.32614/CRAN.package.TipDatingBeast |
| Author: | Adrien Rieux, Camilo Khatchikian |
| Maintainer: | Camilo Khatchikian <ckhatchikian at gmail.com> |
| License: | GPL-2 | GPL-3 [expanded from: GPL (≥ 2)] |
| URL: | https://www.r-project.org |
| NeedsCompilation: | no |
| CRAN checks: | TipDatingBeast results |
| Reference manual: | TipDatingBeast.pdf |
| Package source: | TipDatingBeast_1.1-0.tar.gz |
| Windows binaries: | r-devel: TipDatingBeast_1.1-0.zip, r-release: TipDatingBeast_1.1-0.zip, r-oldrel: TipDatingBeast_1.1-0.zip |
| macOS binaries: | r-release (arm64): TipDatingBeast_1.1-0.tgz, r-oldrel (arm64): TipDatingBeast_1.1-0.tgz, r-release (x86_64): TipDatingBeast_1.1-0.tgz, r-oldrel (x86_64): TipDatingBeast_1.1-0.tgz |
| Old sources: | TipDatingBeast archive |
Please use the canonical form https://CRAN.R-project.org/package=TipDatingBeast to link to this page.
These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.
Health stats visible at Monitor.