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TaxNorm is the R package for a novel feature-wise normalization method for microbiome data based on zero-inflated negative binomial model. This method assumes that the effects of sequencing depth vary for each taxon on their mean and incorporates a rational link of zero probability and taxon dispersion as a function of sequencing depth to better capture the microbiome data nature.
Current stable release:
Build from GitHub:
if (!require(remotes)) install.packages("remotes")
remotes::install_github("wangziyue57/TaxaNorm",
dependencies = TRUE,
build_vignettes = TRUE)These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.
Health stats visible at Monitor.