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SaturnCoefficient: Statistical Evaluation of UMAP Dimensionality Reductions

A metric expressing the quality of a UMAP layout. This is a package that contains the Saturn_coefficient() function that reads an input matrix, its dimensionality reduction produced by UMAP, and evaluates the quality of this dimensionality reduction by producing a real value in the [0; 1] interval. We call this real value Saturn coefficient. A higher value means better dimensionality reduction; a lower value means worse dimensionality reduction. Reference: Davide Chicco et al. "The Saturn coefficient for evaluating the quality of UMAP dimensionality reduction results" (2025, in preparation).

Version: 1.3
Depends: R (≥ 4.0.0)
Imports: MatrixCorrelation, ProjectionBasedClustering, stats, umap
Suggests: knitr, rmarkdown, testthat (≥ 3.0.0)
Published: 2024-12-17
DOI: 10.32614/CRAN.package.SaturnCoefficient
Author: Davide Chicco ORCID iD [aut, cre]
Maintainer: Davide Chicco <davidechicco at davidechicco.it>
BugReports: https://github.com/davidechicco/SaturnCoefficient_R_package/issues
License: GPL-3
URL: https://github.com/davidechicco/SaturnCoefficient_R_package
NeedsCompilation: no
CRAN checks: SaturnCoefficient results

Documentation:

Reference manual: SaturnCoefficient.pdf
Vignettes: SaturnCoefficient (source, R code)

Downloads:

Package source: SaturnCoefficient_1.3.tar.gz
Windows binaries: r-devel: SaturnCoefficient_1.3.zip, r-release: SaturnCoefficient_1.3.zip, r-oldrel: SaturnCoefficient_1.3.zip
macOS binaries: r-release (arm64): SaturnCoefficient_1.3.tgz, r-oldrel (arm64): SaturnCoefficient_1.3.tgz, r-release (x86_64): SaturnCoefficient_1.3.tgz, r-oldrel (x86_64): SaturnCoefficient_1.3.tgz
Old sources: SaturnCoefficient archive

Linking:

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These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.
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