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Functions for semi-automated quality control of bulk RNA-seq data.
Version: | 0.2.1 |
Depends: | R (≥ 4.0) |
Imports: | AnnotationHub, AnnotationFilter, BiocGenerics, ensembldb, circlize, DESeq2, SummarizedExperiment, ComplexHeatmap, matrixStats, grid, ggpointdensity, ggrepel, ggplot2, cowplot, patchwork, purrr, dplyr, stringr, tidyr, tibble, tidyselect, magrittr |
Suggests: | rmarkdown, knitr, recount3, apeglm, ggrastr, gghighlight |
Published: | 2024-07-15 |
DOI: | 10.32614/CRAN.package.RNAseqQC |
Author: | Frederik Ziebell [cre],
Frederik Ziebell |
Maintainer: | Frederik Ziebell <f_ziebell at web.de> |
BugReports: | https://github.com/frederikziebell/RNAseqQC/issues |
License: | Apache License (≥ 2) |
URL: | https://github.com/frederikziebell/RNAseqQC |
NeedsCompilation: | no |
Materials: | README NEWS |
CRAN checks: | RNAseqQC results |
Reference manual: | RNAseqQC.pdf |
Vignettes: |
Creating The Example Data Set RNA-seq Quality Control |
Package source: | RNAseqQC_0.2.1.tar.gz |
Windows binaries: | r-devel: RNAseqQC_0.2.1.zip, r-release: RNAseqQC_0.2.1.zip, r-oldrel: RNAseqQC_0.2.1.zip |
macOS binaries: | r-release (arm64): RNAseqQC_0.2.1.tgz, r-oldrel (arm64): RNAseqQC_0.2.1.tgz, r-release (x86_64): RNAseqQC_0.2.1.tgz, r-oldrel (x86_64): RNAseqQC_0.2.1.tgz |
Old sources: | RNAseqQC archive |
Please use the canonical form https://CRAN.R-project.org/package=RNAseqQC to link to this page.
These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.
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