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REPTILE: Regulatory DNA Element Prediction

Predicting regulatory DNA elements based on epigenomic signatures. This package is more of a set of building blocks than a direct solution. REPTILE regulatory prediction pipeline is built on this R package. See <https://github.com/yupenghe/REPTILE> for more information.

Version: 1.0
Depends: R (≥ 3.2.2), foreach (≥ 1.4.3), doParallel (≥ 1.0.10)
Imports: optparse (≥ 1.3.2), randomForest (≥ 4.6-12), flux (≥ 0.3-0)
Published: 2016-06-21
DOI: 10.32614/CRAN.package.REPTILE
Author: Yupeng He
Maintainer: Yupeng He <yupeng.he.bioinfo at gmail.com>
License: BSD_2_clause + file LICENSE
URL: https://github.com/yupenghe/REPTILE
NeedsCompilation: no
CRAN checks: REPTILE results

Documentation:

Reference manual: REPTILE.pdf

Downloads:

Package source: REPTILE_1.0.tar.gz
Windows binaries: r-devel: REPTILE_1.0.zip, r-release: REPTILE_1.0.zip, r-oldrel: REPTILE_1.0.zip
macOS binaries: r-release (arm64): REPTILE_1.0.tgz, r-oldrel (arm64): REPTILE_1.0.tgz, r-release (x86_64): REPTILE_1.0.tgz, r-oldrel (x86_64): REPTILE_1.0.tgz

Linking:

Please use the canonical form https://CRAN.R-project.org/package=REPTILE to link to this page.

These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.
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