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Power estimation and sample size calculation for 10X Visium Spatial Transcriptomics data to detect differential expressed genes between two conditions based on bootstrap resampling. See Shui et al. (2024) <doi:10.1101/2024.08.30.610564> for method details.
Version: | 0.1.0 |
Depends: | R (≥ 2.10) |
Imports: | scam, Seurat, dplyr, plotly, resample, xgboost, magrittr, rayshader, ggplot2 |
Suggests: | patchwork, boot, knitr, rmarkdown, fields, rayrender, tidyr |
Published: | 2024-09-09 |
DOI: | 10.32614/CRAN.package.PoweREST |
Author: | Lan Shui [aut, cre] |
Maintainer: | Lan Shui <Lan.Shui at uth.tmc.edu> |
License: | MIT + file LICENSE |
NeedsCompilation: | no |
CRAN checks: | PoweREST results |
Reference manual: | PoweREST.pdf |
Vignettes: |
PoweREST (source, R code) |
Package source: | PoweREST_0.1.0.tar.gz |
Windows binaries: | r-devel: PoweREST_0.1.0.zip, r-release: PoweREST_0.1.0.zip, r-oldrel: PoweREST_0.1.0.zip |
macOS binaries: | r-release (arm64): PoweREST_0.1.0.tgz, r-oldrel (arm64): PoweREST_0.1.0.tgz, r-release (x86_64): PoweREST_0.1.0.tgz, r-oldrel (x86_64): PoweREST_0.1.0.tgz |
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These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.
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