The hardware and bandwidth for this mirror is donated by dogado GmbH, the Webhosting and Full Service-Cloud Provider. Check out our Wordpress Tutorial.
If you wish to report a bug, or if you are interested in having us mirror your free-software or open-source project, please feel free to contact us at mirror[@]dogado.de.

PoweREST: A Bootstrap-Based Power Estimation Tool for Spatial Transcriptomics

Power estimation and sample size calculation for 10X Visium Spatial Transcriptomics data to detect differential expressed genes between two conditions based on bootstrap resampling. See Shui et al. (2024) <doi:10.1101/2024.08.30.610564> for method details.

Version: 0.1.0
Depends: R (≥ 2.10)
Imports: scam, Seurat, dplyr, plotly, resample, xgboost, magrittr, rayshader, ggplot2
Suggests: patchwork, boot, knitr, rmarkdown, fields, rayrender, tidyr
Published: 2024-09-09
DOI: 10.32614/CRAN.package.PoweREST
Author: Lan Shui ORCID iD [aut, cre]
Maintainer: Lan Shui <Lan.Shui at uth.tmc.edu>
License: MIT + file LICENSE
NeedsCompilation: no
CRAN checks: PoweREST results

Documentation:

Reference manual: PoweREST.pdf
Vignettes: PoweREST (source, R code)

Downloads:

Package source: PoweREST_0.1.0.tar.gz
Windows binaries: r-devel: PoweREST_0.1.0.zip, r-release: PoweREST_0.1.0.zip, r-oldrel: PoweREST_0.1.0.zip
macOS binaries: r-release (arm64): PoweREST_0.1.0.tgz, r-oldrel (arm64): PoweREST_0.1.0.tgz, r-release (x86_64): PoweREST_0.1.0.tgz, r-oldrel (x86_64): PoweREST_0.1.0.tgz

Linking:

Please use the canonical form https://CRAN.R-project.org/package=PoweREST to link to this page.

These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.
Health stats visible at Monitor.