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Directly pipes raw quantitative PCR (qPCR) machine outputs into downstream analyses using the comparative Ct (Delta-Delta Ct) method described by Livak and Schmittgen (2001) <doi:10.1006/meth.2001.1262>. Streamlines the workflow from 'Excel' export to publication-ready plots. Integrates unique visual quality control by reconstructing 96-well plate heatmaps, allowing users to instantly detect pipetting errors, edge effects, and outliers. Key features include automated error propagation, laboratory master mix calculations, and generation of bar charts and volcano plots.
| Version: | 0.1.0 |
| Imports: | dplyr, readxl, ggplot2, stringr, plotly |
| Suggests: | testthat (≥ 3.0.0) |
| Published: | 2025-12-22 |
| DOI: | 10.32614/CRAN.package.PlateVision |
| Author: | Shubham Love [aut, cre] |
| Maintainer: | Shubham Love <shubhamlove2101 at gmail.com> |
| License: | GPL-3 |
| NeedsCompilation: | no |
| CRAN checks: | PlateVision results |
| Reference manual: | PlateVision.html , PlateVision.pdf |
| Package source: | PlateVision_0.1.0.tar.gz |
| Windows binaries: | r-devel: PlateVision_0.1.0.zip, r-release: PlateVision_0.1.0.zip, r-oldrel: PlateVision_0.1.0.zip |
| macOS binaries: | r-release (arm64): PlateVision_0.1.0.tgz, r-oldrel (arm64): PlateVision_0.1.0.tgz, r-release (x86_64): PlateVision_0.1.0.tgz, r-oldrel (x86_64): PlateVision_0.1.0.tgz |
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These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.
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