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PhaseTypeR: General-Purpose Phase-Type Functions

General implementation of core function from phase-type theory. 'PhaseTypeR' can be used to model continuous and discrete phase-type distributions, both univariate and multivariate. The package includes functions for outputting the mean and (co)variance of phase-type distributions; their density, probability and quantile functions; functions for random draws; functions for reward-transformation; and functions for plotting the distributions as networks. For more information on these functions please refer to Bladt and Nielsen (2017, ISBN: 978-1-4939-8377-3) and Campillo Navarro (2019) <https://orbit.dtu.dk/en/publications/order-statistics-and-multivariate-discrete-phase-type-distributio>.

Version: 1.0.4
Imports: expm, igraph, methods
Suggests: knitr, partitions, rmarkdown, testthat
Published: 2022-07-21
DOI: 10.32614/CRAN.package.PhaseTypeR
Author: Iker Rivas-González ORCID iD [aut, cre], Asger Hobolth [aut], Lars Nørvang Andersen [aut], Colin Guetemme [aut]
Maintainer: Iker Rivas-González <ikerrivas96 at gmail.com>
BugReports: https://github.com/rivasiker/PhaseTypeR/issues
License: GPL-3
URL: https://rivasiker.github.io/PhaseTypeR/, https://github.com/rivasiker/PhaseTypeR
NeedsCompilation: no
Materials: README NEWS
In views: Distributions
CRAN checks: PhaseTypeR results

Documentation:

Reference manual: PhaseTypeR.pdf
Vignettes: PhaseTypeR
Using PhaseTypeR for population genetics
Using PhaseTypeR for the site frequency spectrum

Downloads:

Package source: PhaseTypeR_1.0.4.tar.gz
Windows binaries: r-devel: PhaseTypeR_1.0.4.zip, r-release: PhaseTypeR_1.0.4.zip, r-oldrel: PhaseTypeR_1.0.4.zip
macOS binaries: r-release (arm64): PhaseTypeR_1.0.4.tgz, r-oldrel (arm64): PhaseTypeR_1.0.4.tgz, r-release (x86_64): PhaseTypeR_1.0.4.tgz, r-oldrel (x86_64): PhaseTypeR_1.0.4.tgz
Old sources: PhaseTypeR archive

Linking:

Please use the canonical form https://CRAN.R-project.org/package=PhaseTypeR to link to this page.

These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.
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