The hardware and bandwidth for this mirror is donated by dogado GmbH, the Webhosting and Full Service-Cloud Provider. Check out our Wordpress Tutorial.
If you wish to report a bug, or if you are interested in having us mirror your free-software or open-source project, please feel free to contact us at mirror[@]dogado.de.
Here we provide a set of phenotypes that can be used as predictors in prediction models or best practice research.
These phenotypes can be extracted from the PhenotypeLibrary R package. To install the R package run:
To extract the cohort definition for Alcoholism with an id of 1165, just run:
in general you can extract all the cohorts by running:
| Phenotype Name | Disorder classification | OHDSI Phenotype library ID |
|---|---|---|
| Alcoholism | Behavioral | 1165 |
| Smoking | Behavioral | 1166 |
| Anemia | Blood | 1188 |
| Osteoarthritis | Bone | 1184 |
| Osteoporosis | Bone | 1185 |
| Cancer | Cancer | 1215 |
| Atrial fibrillation | Cardiovascular | 1160 |
| Congestive heart failure | Cardiovascular | 1154 |
| Coronary artery disease | Cardiovascular | 1162 |
| Heart valve disorder | Cardiovascular | 1172 |
| Hyperlipidemia | Cardiovascular | 1170 |
| Hypertension | Cardiovascular | 1198 |
| Angina | Cardiovascular | 1159 |
| Skin Ulcer | Debility | 1168 |
| Diabetes type 1 | Endocrine | 1193 |
| Diabetes type 2 | Endocrine | 1194 |
| Hypothyroidism | Endocrine | 1171 |
| Obesity | Endocrine | 1179 |
| Gastroesophageal reflux disease (GERD) | GI | 1178 |
| Gastrointestinal (GI) bleed | GI | 1197 |
| Inflammatory bowel disorder (IBD) | GI/Rheumatology | 1180 |
| Hormonal contraceptives | Gynecologic | 1190 |
| Antibiotics Aminoglycosides | Infection | 1201 |
| Antibiotics Carbapenems | Infection | 1202 |
| Antibiotics Cephalosporins | Infection | 1203 |
| Antibiotics Fluoroquinolones | Infection | 1204 |
| Antibiotics Glycopeptides and lipoglycopeptides | Infection | 1205 |
| Antibiotics Macrolides | Infection | 1206 |
| Antibiotics Monobactams | Infection | 1207 |
| Antibiotics Oxazolidinones | Infection | 1208 |
| Antibiotics Penicillins | Infection | 1209 |
| Antibiotics Polypeptides | Infection | 1210 |
| Antibiotics Rifamycins | Infection | 1211 |
| Antibiotics Sulfonamides | Infection | 1212 |
| Antibiotics Streptogramins | Infection | 1213 |
| Antibiotics Tetracyclines | Infection | 1214 |
| Pneumonia | Infection/Respiratory | 1199 |
| Sepsis | Infection | 1176 |
| Urinary tract infection (UTI) | Infection | 1186 |
| Hepatitis | Liver | 1169 |
| Anxiety | Mood | 1189 |
| Depression (MDD) | Mood | 1161 |
| Psychotic disorder | Mood | 1175 |
| Antiepileptics (pain) | Neurology/Pain | 1183 |
| Seizure | Neurology | 1153 |
| Hemorrhagic stroke | Neurology/Vascular | 1156 |
| Non-hemorrhagic stroke | Neurology/Vascular | 1155 |
| Acetaminophen prescription | Pain/Infection | 1187 |
| Low back pain | Pain | 1173 |
| Neuropathy | Pain/Neurology | 1174 |
| Opioids | Pain | 1182 |
| Acute kidney injury | Kidney | 1163 |
| Chronic kidney disease | Kidney | 1191 |
| Asthma | Respiratory | 1164 |
| Chronic obstructive pulmonary disorder (COPD) | Respiratory | 1192 |
| Dyspnea | Respiratory | 1195 |
| Respiratory failure | Respiratory | 1177 |
| Sleep apnea | Respiratory | 1167 |
| Rheumatoid arthritis | Rheumatology | 1200 |
| Steroids | Rheumatology/Pain/Pulmonary | 1181 |
| Peripheral vascular disease | Vascular | 1157 |
| Aspirin | Vascular | 1158 |
| Deep vein thrombosis (DVT) | Vascular | 1152 |
| Edema | Vascular | 1196 |
These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.
Health stats visible at Monitor.