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Comprehensive network analysis package. Calculate correlation network fastly, accelerate lots of analysis by parallel computing. Support for multi-omics data, search sub-nets fluently. Handle bigger data, more than 10,000 nodes in each omics. Offer various layout method for multi-omics network and some interfaces to other software ('Gephi', 'Cytoscape', 'ggplot2'), easy to visualize. Provide comprehensive topology indexes calculation, including ecological network stability.
Version: | 0.1.2 |
Depends: | R (≥ 4.1.0), igraph (≥ 1.3.5) |
Imports: | graphics, dplyr, ggplot2 (≥ 3.2.0), ggnewscale, ggrepel, RColorBrewer, grDevices, magrittr, reshape2, stats, tibble, utils, pcutils (≥ 0.2.5), rlang |
Suggests: | pheatmap, vegan, stringr, foreach, doSNOW, snow, knitr, rmarkdown, prettydoc, Hmisc, gifski, ggraph, networkD3, ggpmisc, ggtree, treeio, circlize, ggpubr |
Published: | 2024-03-25 |
DOI: | 10.32614/CRAN.package.MetaNet |
Author: | Chen Peng |
Maintainer: | Chen Peng <pengchen2001 at zju.edu.cn> |
BugReports: | https://github.com/Asa12138/MetaNet/issues |
License: | GPL-3 |
URL: | https://github.com/Asa12138/MetaNet |
NeedsCompilation: | no |
Materials: | README NEWS |
CRAN checks: | MetaNet results |
Reference manual: | MetaNet.pdf |
Vignettes: |
MetaNet |
Package source: | MetaNet_0.1.2.tar.gz |
Windows binaries: | r-devel: MetaNet_0.1.2.zip, r-release: MetaNet_0.1.2.zip, r-oldrel: MetaNet_0.1.2.zip |
macOS binaries: | r-release (arm64): MetaNet_0.1.2.tgz, r-oldrel (arm64): MetaNet_0.1.2.tgz, r-release (x86_64): MetaNet_0.1.2.tgz, r-oldrel (x86_64): MetaNet_0.1.2.tgz |
Old sources: | MetaNet archive |
Reverse suggests: | pctax, ReporterScore |
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These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.
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