The hardware and bandwidth for this mirror is donated by dogado GmbH, the Webhosting and Full Service-Cloud Provider. Check out our Wordpress Tutorial.
If you wish to report a bug, or if you are interested in having us mirror your free-software or open-source project, please feel free to contact us at mirror[@]dogado.de.

metaIntegrator

This is README space for metaIntegrator_public. To be filled with a README if necessary, or for internal use if required.

What is this repository for?

• This repository is for building and testing the metaIntegrator_public R package

Who do I talk to?

• Either create an issue, email adityamr [at] stanford.edu, or email hayneswa [at] stanford.edu

How do I install the MetaIntegrator package?

For the current version on CRAN:

install.packages("MetaIntegrator")

For the current development version:

Run the following lines in R:

library(devtools)

install_bitbucket("khatrilab/metaIntegrator_public", auth_user=USERNAME, password=PASSWORD)

where USERNAME and PASSWORD are your bitbucket username and password.

If you get a permissions error, ask Aditya for the app password.

If you get “ERROR: dependency ‘deapathways’ is not available for package ‘MetaIntegrator’”, follow these steps:

download the deapathways_1.0.tar.gz file (which is stored in metaIntegrator_public/inst).

install deapathways, either by going to the command line, navigating to the folder containing
the tar.gz file in the command line and running R CMD INSTALL deapathways_1.0.tar.gz,
or by running install.packages(PATH_TO_FILE, repos = NULL, type="source")
where PATH_TO_FILE is the path to the deapathways_1.0.tar.gz file

Documentation

To read the Vignette go to: http://khatrilab.bitbucket.org/MetaIntegratorVignette/

These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.
Health stats visible at Monitor.