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Contains the Markov cluster algorithm (MCL) for identifying clusters in networks and graphs. The algorithm simulates random walks on a (n x n) matrix as the adjacency matrix of a graph. It alternates an expansion step and an inflation step until an equilibrium state is reached.
Version: | 1.0 |
Depends: | R (≥ 2.10.0) |
Imports: | expm |
Published: | 2015-03-11 |
DOI: | 10.32614/CRAN.package.MCL |
Author: | Martin L. Jäger |
Maintainer: | Ronja Foraita <foraita at bips.uni-bremen.de> |
License: | GPL-2 | GPL-3 [expanded from: GPL (≥ 2)] |
NeedsCompilation: | no |
CRAN checks: | MCL results |
Reference manual: | MCL.pdf |
Package source: | MCL_1.0.tar.gz |
Windows binaries: | r-devel: MCL_1.0.zip, r-release: MCL_1.0.zip, r-oldrel: MCL_1.0.zip |
macOS binaries: | r-release (arm64): MCL_1.0.tgz, r-oldrel (arm64): MCL_1.0.tgz, r-release (x86_64): MCL_1.0.tgz, r-oldrel (x86_64): MCL_1.0.tgz |
Reverse imports: | aPEAR, HPiP, mina, miRSM, miRspongeR, RITAN |
Reverse suggests: | FCPS, simplifyEnrichment |
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These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.
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