MALDIquant: Quantitative Analysis of Mass Spectrometry Data

A complete analysis pipeline for matrix-assisted laser desorption/ionization-time-of-flight (MALDI-TOF) and other two-dimensional mass spectrometry data. In addition to commonly used plotting and processing methods it includes distinctive features, namely baseline subtraction methods such as morphological filters (TopHat) or the statistics-sensitive non-linear iterative peak-clipping algorithm (SNIP), peak alignment using warping functions, handling of replicated measurements as well as allowing spectra with different resolutions.

Version:	1.22.2
Depends:	R (≥ 4.0.0), methods
Imports:	parallel
Suggests:	knitr, testthat (≥ 0.8)
Published:	2024-01-22
Author:	Sebastian Gibb [aut, cre], Korbinian Strimmer [ths], Sigurdur Smarason [ctb], Laurent Gatto [ctb], Paolo Inglese [ctb]
Maintainer:	Sebastian Gibb <mail at sebastiangibb.de>
BugReports:	https://github.com/sgibb/MALDIquant/issues/
License:	GPL (≥ 3)
URL:	https://strimmerlab.github.io/software/maldiquant/, https://github.com/sgibb/MALDIquant/
NeedsCompilation:	yes
Citation:	MALDIquant citation info
Materials:	NEWS
In views:	ChemPhys
CRAN checks:	MALDIquant results

Documentation:

Reference manual:	MALDIquant.pdf
Vignettes:	MALDIquant: Quantitative Analysis of Mass Spectrometry Data

Downloads:

Package source:	MALDIquant_1.22.2.tar.gz
Windows binaries:	r-devel: MALDIquant_1.22.2.zip, r-release: MALDIquant_1.22.2.zip, r-oldrel: MALDIquant_1.22.2.zip
macOS binaries:	r-release (arm64): MALDIquant_1.22.2.tgz, r-oldrel (arm64): MALDIquant_1.22.2.tgz, r-release (x86_64): MALDIquant_1.22.2.tgz, r-oldrel (x86_64): MALDIquant_1.22.2.tgz
Old sources:	MALDIquant archive

Reverse dependencies:

Reverse depends:	MALDIquantForeign, MALDIrppa, MGMS2, MSclassifR
Reverse imports:	IsoCor, maldipickr, MSnbase
Reverse suggests:	RforProteomics, xcms

Linking:

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