The hardware and bandwidth for this mirror is donated by dogado GmbH, the Webhosting and Full Service-Cloud Provider. Check out our Wordpress Tutorial.
If you wish to report a bug, or if you are interested in having us mirror your free-software or open-source project, please feel free to contact us at mirror[@]dogado.de.

LDAcoop: Analysis of Data from Limiting Dilution Assay (LDA) with or without Cellular Cooperation

Cellular cooperation compromises the established method of calculating clonogenic activity from limiting dilution assay (LDA) data. This tool provides functions that enable robust analysis in presence or absence of cellular cooperation. The implemented method incorporates the same cooperativity module to model the non-linearity associated with cellular cooperation as known from the colony formation assay (Brix et al. (2021) <doi:10.1038/s41596-021-00615-0>: "Analysis of clonogenic growth in vitro." Nature protocols).

Version: 0.1.2
Depends: R (≥ 3.5.0)
Imports: Hmisc
Suggests: knitr, rmarkdown, testthat (≥ 3.0.0)
Published: 2024-07-17
DOI: 10.32614/CRAN.package.LDAcoop
Author: Daniel Samaga [cre, aut], Nikko Brix [aut], Benedek Danko [aut], Kirsten Lauber [aut], Horst Zitzelsberger [aut]
Maintainer: Daniel Samaga <daniel.samaga at helmholtz-munich.de>
BugReports: https://github.com/ZytoHMGU/LDAcoop/issues
License: GPL-3
URL: https://github.com/ZytoHMGU/LDAcoop
NeedsCompilation: no
Materials: README
CRAN checks: LDAcoop results

Documentation:

Reference manual: LDAcoop.pdf
Vignettes: LDAcoop

Downloads:

Package source: LDAcoop_0.1.2.tar.gz
Windows binaries: r-devel: LDAcoop_0.1.2.zip, r-release: LDAcoop_0.1.2.zip, r-oldrel: LDAcoop_0.1.2.zip
macOS binaries: r-release (arm64): LDAcoop_0.1.2.tgz, r-oldrel (arm64): LDAcoop_0.1.2.tgz, r-release (x86_64): LDAcoop_0.1.2.tgz, r-oldrel (x86_64): LDAcoop_0.1.2.tgz
Old sources: LDAcoop archive

Linking:

Please use the canonical form https://CRAN.R-project.org/package=LDAcoop to link to this page.

These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.
Health stats visible at Monitor.