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GiANT: Gene Set Uncertainty in Enrichment Analysis

Toolbox for various enrichment analysis methods and quantification of uncertainty of gene sets, Schmid et al. (2016) <doi:10.1093/bioinformatics/btw030>.

Version: 1.3.4
Depends: R (≥ 3.5.0)
Imports: parallel, graphics, grDevices, methods, stats, utils
Suggests: fdrtool, st, limma, globaltest, DESeq2, GlobalAncova
Published: 2024-09-05
DOI: 10.32614/CRAN.package.GiANT
Author: Florian Schmid [aut], Christoph Muessel [aut], Johann M. Kraus [aut], Hans A. Kestler [aut], Hans A. Kestler [cre]
Maintainer: Hans A. Kestler <hans.kestler at uni-ulm.de>
License: Artistic-2.0
NeedsCompilation: no
Citation: GiANT citation info
CRAN checks: GiANT results

Documentation:

Reference manual: GiANT.pdf
Vignettes: Detailed introduction to all major features of GiANT (source, R code)

Downloads:

Package source: GiANT_1.3.4.tar.gz
Windows binaries: r-devel: GiANT_1.3.4.zip, r-release: GiANT_1.3.4.zip, r-oldrel: GiANT_1.3.4.zip
macOS binaries: r-release (arm64): GiANT_1.3.4.tgz, r-oldrel (arm64): GiANT_1.3.4.tgz, r-release (x86_64): GiANT_1.3.4.tgz, r-oldrel (x86_64): GiANT_1.3.4.tgz
Old sources: GiANT archive

Linking:

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These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.
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