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Simulating single cell RNA-seq data with complicated structure. This package is developed based on the Splat method (Zappia, Phipson and Oshlack (2017) <doi:10.1186/s13059-017-1305-0>). 'GeneScape' incorporates additional features to simulate single cell RNA-seq data with complicated differential expression and correlation structures, such as sub-cell-types, correlated genes (pathway genes) and hub genes.
| Version: | 1.0 |
| Imports: | MASS (≥ 7.3-53.1), corpcor (≥ 1.6.10), stats |
| Published: | 2023-06-13 |
| DOI: | 10.32614/CRAN.package.GeneScape |
| Author: | Qi Gao [aut, cre] |
| Maintainer: | Qi Gao <qi.gao at duke.edu> |
| License: | GPL (≥ 3) |
| NeedsCompilation: | no |
| CRAN checks: | GeneScape results |
| Reference manual: | GeneScape.pdf |
| Package source: | GeneScape_1.0.tar.gz |
| Windows binaries: | r-devel: GeneScape_1.0.zip, r-release: GeneScape_1.0.zip, r-oldrel: GeneScape_1.0.zip |
| macOS binaries: | r-release (arm64): GeneScape_1.0.tgz, r-oldrel (arm64): GeneScape_1.0.tgz, r-release (x86_64): GeneScape_1.0.tgz, r-oldrel (x86_64): GeneScape_1.0.tgz |
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These binaries (installable software) and packages are in development.
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