GOCompare: Comprehensive GO Terms Comparison Between Species
Supports the assessment of functional enrichment analyses obtained for several lists of genes and provides a workflow to analyze them between two species via weighted graphs. Methods are described in Sosa et al. (2023) <doi:10.1016/j.ygeno.2022.110528>.
| Version: | 1.0.2.1 |
| Depends: | R (≥ 4.0.0) |
| Imports: | base (≥ 3.5), utils (≥ 3.5), methods (≥ 3.5), stats, grDevices, ape, vegan, ggplot2, ggrepel, igraph, parallel, stringr, mathjaxr |
| Suggests: | testthat (≥ 3.0.0) |
| Published: | 2022-12-09 |
| Author: | Chrystian Camilo Sosa
 [aut, cre,
cph],
Diana Carolina Clavijo-Buriticá [aut],
Mauricio Alberto Quimbaya [aut],
Maria Victoria Diaz [ctb],
Camila Riccio Rengifo [ctb],
Nicolas López-Rozo [ctb],
Victor Hugo García Merchán [aut, ctb],
Arlen James Mosquera [ctb],
Andrés Álvarez [ctb] |
| Maintainer: | Chrystian Camilo Sosa <ccsosaa at javerianacali.edu.co> |
| BugReports: | https://github.com/ccsosa/GOCompare/issues |
| License: | GPL (≥ 3) |
| URL: | https://github.com/ccsosa/GOCompare |
| NeedsCompilation: | no |
| CRAN checks: | GOCompare results |
Documentation:
| Reference manual: | GOCompare.pdf |
Downloads:
| Package source: | GOCompare_1.0.2.1.tar.gz |
| Windows binaries: | r-devel: GOCompare_1.0.2.1.zip, r-release: GOCompare_1.0.2.1.zip, r-oldrel: GOCompare_1.0.2.1.zip |
| macOS binaries: | r-release (arm64): GOCompare_1.0.2.1.tgz, r-oldrel (arm64): GOCompare_1.0.2.1.tgz, r-release (x86_64): GOCompare_1.0.2.1.tgz, r-oldrel (x86_64): GOCompare_1.0.2.1.tgz |
| Old sources: | GOCompare archive |
Linking:
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