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FossilSim: Simulation of Fossil and Taxonomy Data

Simulating taxonomy and fossil data on phylogenetic trees under mechanistic models of speciation, preservation and sampling.

Version: 2.3.3
Imports: ape
Suggests: paleotree, knitr, rmarkdown, devtools, TreeSim
Published: 2024-04-29
Author: Rachel Warnock [aut, cph], Joelle Barido-Sottani [aut, cre, cph], Walker Pett [aut, cph], O'Reilly Joseph [aut, cph]
Maintainer: Joelle Barido-Sottani <joelle.barido-sottani at m4x.org>
License: GPL-3
NeedsCompilation: no
Language: en-GB
Materials: README NEWS
In views: Phylogenetics
CRAN checks: FossilSim results

Documentation:

Reference manual: FossilSim.pdf
Vignettes: Exporting sampled ancestor trees
Simulating fossils
Introduction to FossilSim
Converting from and to paleotree format
Simulating trees from the fossilized birth-death process
Simulating taxonomy

Downloads:

Package source: FossilSim_2.3.3.tar.gz
Windows binaries: r-devel: FossilSim_2.3.3.zip, r-release: FossilSim_2.3.3.zip, r-oldrel: FossilSim_2.3.3.zip
macOS binaries: r-release (arm64): FossilSim_2.3.3.tgz, r-oldrel (arm64): FossilSim_2.3.3.tgz, r-release (x86_64): FossilSim_2.3.3.tgz, r-oldrel (x86_64): FossilSim_2.3.3.tgz
Old sources: FossilSim archive

Reverse dependencies:

Reverse imports: FossilSimShiny

Linking:

Please use the canonical form https://CRAN.R-project.org/package=FossilSim to link to this page.

These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.
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