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NEWS

DGEobj R Package

v1.1.2

• Made all Bioconductor packages optional (suggested)
• Added a new, minimal “mini” example object that has no internal Bioconductor-based features (ie normalization, analysis) to allow for clean, simple examples that do not depend on suggested packages
• Testing updated so that when Bioconductor suggested packages are unavailable the tests will not be run

v1.1.1

• Updated tests and examples so that when suggested packages are unavailable the examples and/or tests dependent on them are not run

v1.1

• made GenomicRanges package optional - used only for exon/gene levels
• added “protein” level data, reviewed/updated isoform data for proper handling
• added imputationMatrix as a type of metadata
• reworked reset to resolve issues and remove unneeded code
• updated tests and documentation

v1.0.3

• significant documentation review/updates
• underlying structure - added a few new fields and cleaned up unneeded methods
• updated the example object with additional information
• vignette now setup to use the precompiled paradigm

v1.0.1

• Initial public release to CRAN

These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.
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