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Simulates and computes the (maximum) likelihood of a dynamical model of island biota assembly through speciation, immigration and extinction. See Valente et al. (2015) <doi:10.1111/ele.12461>.
Version: | 4.4.1 |
Depends: | R (≥ 4.2.0) |
Imports: | deSolve, graphics, stats, utils, DDD (≥ 5.0), subplex, Matrix, tensor, pracma, testit, foreach, doParallel, magrittr, parallel, Rcpp (≥ 1.0.10) |
LinkingTo: | Rcpp, RcppEigen, BH (≥ 1.81.0-1) |
Suggests: | covr, testthat (≥ 2.1.0), knitr, rmarkdown, gridExtra, dplyr, ggplot2, ggtree (≥ 3.0.0), tidytree, tidyr, purrr, ape, phytools, tibble |
Enhances: | doMC |
Published: | 2023-10-21 |
DOI: | 10.32614/CRAN.package.DAISIE |
Author: | Rampal S. Etienne |
Maintainer: | Rampal S. Etienne <r.s.etienne at rug.nl> |
BugReports: | https://github.com/rsetienne/DAISIE/issues |
License: | GPL (≥ 3) | file LICENSE |
Copyright: | See the file COPYRIGHTS for various DAISIE copyright details DAISIE copyright details |
URL: | https://github.com/rsetienne/DAISIE, https://rsetienne.github.io/DAISIE/ |
NeedsCompilation: | yes |
SystemRequirements: | C++17 |
Materials: | NEWS |
CRAN checks: | DAISIE results |
Reference manual: | DAISIE.pdf |
Vignettes: |
Demo: Fitting clade-specific and island-wide diversity-dependence models in DAISIE Demo optimizing parameters Demo simulating islands DAISIE 'stac' values |
Package source: | DAISIE_4.4.1.tar.gz |
Windows binaries: | r-devel: DAISIE_4.4.1.zip, r-release: DAISIE_4.4.1.zip, r-oldrel: DAISIE_4.4.1.zip |
macOS binaries: | r-release (arm64): DAISIE_4.4.1.tgz, r-oldrel (arm64): DAISIE_4.4.1.tgz, r-release (x86_64): DAISIE_4.4.1.tgz, r-oldrel (x86_64): DAISIE_4.4.1.tgz |
Old sources: | DAISIE archive |
Reverse imports: | DAISIEprep |
Reverse suggests: | nLTT |
Please use the canonical form https://CRAN.R-project.org/package=DAISIE to link to this page.
These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.
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