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Calculates the convergence score defined by Whitfield et al. 2026 <doi:10.1158/0008-5472.CAN-25-4403>. It allows visualization of this score alongside qualitative and quantitative Seurat object metadata via barplots and density curves, and runs appropriate statistical tests for associations.
| Version: | 0.99.1 |
| Depends: | R (≥ 4.4.0) |
| Imports: | dplyr, ggplot2, magrittr, scales, Seurat, SeuratObject |
| Suggests: | BiocStyle, knitr, msigdbr, rmarkdown, testthat (≥ 3.0.0) |
| Published: | 2026-10-10 |
| DOI: | 10.32614/CRAN.package.ConvergeR |
| Author: | Paul de Boissier |
| Maintainer: | Paul de Boissier <paul.deboissier04 at gmail.com> |
| BugReports: | https://github.com/pauldeboissier1/ConvergeR/issues |
| License: | GPL-3 |
| URL: | https://github.com/pauldeboissier1/ConvergeR |
| NeedsCompilation: | no |
| Citation: | ConvergeR citation info |
| Materials: | NEWS |
| CRAN checks: | ConvergeR results |
| Reference manual: | ConvergeR.html , ConvergeR.pdf |
| Vignettes: |
Introduction to ConvergeR (source, R code) |
| Package source: | ConvergeR_0.99.1.tar.gz |
| Windows binaries: | r-devel: not available, r-release: not available, r-oldrel: ConvergeR_0.99.1.zip |
| macOS binaries: | r-release (arm64): ConvergeR_0.99.1.tgz, r-oldrel (arm64): ConvergeR_0.99.1.tgz, r-release (x86_64): ConvergeR_0.99.1.tgz, r-oldrel (x86_64): ConvergeR_0.99.1.tgz |
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These binaries (installable software) and packages are in development.
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