CKMRpop: Forward-in-Time Simulation and Tallying of Pairwise Relationships
Provides an R wrapper around the program 'spip' (<https://onlinelibrary.wiley.com/doi/abs/10.1111/j.1471-8286.2005.00884.x>), a C program for the simulation of pedigrees within age-structured populations with user-specified life histories. Also includes a variety of functions to parse 'spip' output to compile information about related pairs amongst simulated, sampled individuals, to assess the feasibility and potential accuracy of close-kin mark-recapture (CKMR). Full documentation and vignettes are mirrored at <https://eriqande.github.io/CKMRpop/index.html> and can be read online there.
| Version: | 0.1.3 |
| Depends: | R (≥ 3.5.0) |
| Imports: | dplyr, ggforce, ggplot2, ggraph, igraph, magrittr, purrr, Rcpp (≥ 1.0.4), readr, stats, stringr, tibble, tidygraph, tidyr, vroom |
| LinkingTo: | Rcpp |
| Suggests: | knitr, rmarkdown, tidyverse |
| Published: | 2021-07-17 |
| Author: | Eric C. Anderson 
[aut, cre] |
| Maintainer: | Eric C. Anderson <eric.anderson at noaa.gov> |
| License: | CC0 |
| NeedsCompilation: | yes |
| Materials: | README NEWS |
| CRAN checks: | CKMRpop results |
Documentation:
| Reference manual: | CKMRpop.pdf |
| Vignettes: |
About spip simple-example-with-migration species_1_simulation |
Downloads:
| Package source: | CKMRpop_0.1.3.tar.gz |
| Windows binaries: | r-devel: CKMRpop_0.1.3.zip, r-release: CKMRpop_0.1.3.zip, r-oldrel: CKMRpop_0.1.3.zip |
| macOS binaries: | r-release (arm64): CKMRpop_0.1.3.tgz, r-oldrel (arm64): CKMRpop_0.1.3.tgz, r-release (x86_64): CKMRpop_0.1.3.tgz, r-oldrel (x86_64): CKMRpop_0.1.3.tgz |
| Old sources: | CKMRpop archive |
Linking:
Please use the canonical form https://CRAN.R-project.org/package=CKMRpop to link to this page.