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CKMRpop: Forward-in-Time Simulation and Tallying of Pairwise Relationships

Provides an R wrapper around the program 'spip' (<https://onlinelibrary.wiley.com/doi/abs/10.1111/j.1471-8286.2005.00884.x>), a C program for the simulation of pedigrees within age-structured populations with user-specified life histories. Also includes a variety of functions to parse 'spip' output to compile information about related pairs amongst simulated, sampled individuals, to assess the feasibility and potential accuracy of close-kin mark-recapture (CKMR). Full documentation and vignettes are mirrored at <https://eriqande.github.io/CKMRpop/index.html> and can be read online there.

Version: 0.1.3
Depends: R (≥ 3.5.0)
Imports: dplyr, ggforce, ggplot2, ggraph, igraph, magrittr, purrr, Rcpp (≥ 1.0.4), readr, stats, stringr, tibble, tidygraph, tidyr, vroom
LinkingTo: Rcpp
Suggests: knitr, rmarkdown, tidyverse
Published: 2021-07-17
DOI: 10.32614/CRAN.package.CKMRpop
Author: Eric C. Anderson ORCID iD [aut, cre]
Maintainer: Eric C. Anderson <eric.anderson at noaa.gov>
License: CC0
NeedsCompilation: yes
Materials: README NEWS
CRAN checks: CKMRpop results

Documentation:

Reference manual: CKMRpop.pdf
Vignettes: About spip
simple-example-with-migration
species_1_simulation

Downloads:

Package source: CKMRpop_0.1.3.tar.gz
Windows binaries: r-devel: CKMRpop_0.1.3.zip, r-release: CKMRpop_0.1.3.zip, r-oldrel: CKMRpop_0.1.3.zip
macOS binaries: r-release (arm64): CKMRpop_0.1.3.tgz, r-oldrel (arm64): CKMRpop_0.1.3.tgz, r-release (x86_64): CKMRpop_0.1.3.tgz, r-oldrel (x86_64): CKMRpop_0.1.3.tgz
Old sources: CKMRpop archive

Linking:

Please use the canonical form https://CRAN.R-project.org/package=CKMRpop to link to this page.

These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.
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