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BreedReliabR 0.1.1
- Add Santosh Patil as a package author for substantial R programming
and coding contribution. Ashutosh Sawarkar remains the sole
maintainer.
- Update the maintainer email and add author contact and ORCID
metadata.
- Metadata-only release; no statistical, API, or package behaviour
changes.
BreedReliabR 0.1.0
First research release
- Freeze the seven-function research API for externally supplied
prediction means and full joint prediction-error covariance.
- Provide M0–M3 comparison, expected selected-set reliability,
candidate-level advancement probabilities, and the relative uncertainty
diagnostic Omega(H).
- Add geometric target-environment support diagnostics and an H-curve
workflow.
- Clarify assumptions, fixed-k interpretation, Monte Carlo error, RNG
behavior, candidate-major covariance ordering, and the limits of
geometric support.
- Retain the simulated maize data and add a reproducible
methods/empirical validation vignette. No G2F raw data are
included.
- External evidence: 2024 validation and forward year-held-out 2022
replication found poor absolute calibration, M2 worst, a small M3 Brier
advantage over M1, and overpredicted selected-set reliability. The
corrected L3a 2022 baseline is canonical; the original denominator error
and correction are retained in the separate audit archive.
Known limitations: probabilities are conditional on the supplied
upstream predictive distribution and target-environment specification.
Empirical calibration is poor in the two validation settings; software
release readiness does not imply calibrated probabilities or guaranteed
genetic gain.
BreedReliabR 0.0.3
- Added br_compare() and br_curve() as wrappers around the unchanged
H2 core.
- Added range and standardized nearest-environment support
diagnostics.
- Added compact S3 print, summary and plot methods for the new result
classes.
- Added entirely simulated maize data, a reproducible generation
script, and an executable end-to-end vignette with explicit fit-import
and calibration limits.
- Added executable examples to all principal public functions and
regression tests.
- Clarified expected-fraction set reliability, Monte Carlo limitations
and fixed TPE assumptions. No core mathematics or H2 tests were
changed.
These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.
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