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BBI: Benthic Biotic Indices Calculation from Composition Data

Set of functions to calculate Benthic Biotic Indices from composition data, obtained whether from morphotaxonomic inventories or sequencing data. Based on reference ecological weights publicly available for a set of commonly used marine biotic indices, such as AMBI (A Marine Biotic Index, Borja et al., 2000) <doi:10.1016/S0025-326X(00)00061-8> NSI (Norwegian Sensitivity Index) and ISI (Indicator Species Index) (Rygg 2013, <ISBN:978-82-577-6210-0>). It provides the ecological quality status of the samples based on each BBI as well as the normalized Ecological Quality Ratio.

Version: 0.3.0
Depends: vegan
Published: 2018-10-17
DOI: 10.32614/CRAN.package.BBI
Author: Tristan Cordier [aut, cre]
Maintainer: Tristan Cordier <tristan.cordier at gmail.com>
BugReports: https://github.com/trtcrd/BBI/issues
License: AGPL-3 | file LICENSE
URL: https://github.com/trtcrd/BBI
NeedsCompilation: no
Materials: README
CRAN checks: BBI results

Documentation:

Reference manual: BBI.pdf

Downloads:

Package source: BBI_0.3.0.tar.gz
Windows binaries: r-devel: BBI_0.3.0.zip, r-release: BBI_0.3.0.zip, r-oldrel: BBI_0.3.0.zip
macOS binaries: r-release (arm64): BBI_0.3.0.tgz, r-oldrel (arm64): BBI_0.3.0.tgz, r-release (x86_64): BBI_0.3.0.tgz, r-oldrel (x86_64): BBI_0.3.0.tgz
Old sources: BBI archive

Linking:

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These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.
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