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Unreleased

ApplyPolygenicScore 3.0.1

Added

• Added hemizygous allele handling to dosage calculation
• Added toggle to hexbinplot at sample size threshold in create.pgs.with.continuous.phenotype.plot

Changed

• Updated INDEL effect switch reporting by strand flip checker
• Updated data structuring for automated statistical analysis in apply.polygenic.score

ApplyPolygenicScore 3.0.0 (2024-12-02)

Added

• Added handling of overlapping deletion allele notation
• Added secondary PGS/VCF variant matching method using rsID after first attempt with genomic coordinates
• Added checks for rsID as an optional column in input PGS weight files
• Added functionality to assess allele matches and correct strand flips

ApplyPolygenicScore 2.0.0 (2024-07-31)

Changed

• Renamed functions starting with reserved vocabulary for S3 generic methods merge. -> combine.

ApplyPolygenicScore 1.0.0 (2024-07-25)

• First release

ApplyPolygenicScore 0.1.0 (2024-07-25)

• INITIAL FEATURES

These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.
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