Depends: R (>= 2.10)
Imports: zoo, XML, plyr, jsonlite, lubridate, tibbletime

Depends: R (>= 2.10)
Suggests: knitr, rmarkdown, testthat (>= 3.0.0)

Depends: R (>= 3.4)
Imports: stats, graphics, ggplot2, reshape2, Rcpp
LinkingTo: Rcpp
Suggests: testthat, knitr, rmarkdown, gridExtra, ggthemes

Depends: R (>= 4.0)
Imports: stats, tibble, ggplot2, reshape2, tidytree, phyclust, dplyr,
ape, Rcpp
LinkingTo: Rcpp
Suggests: testthat, knitr, rmarkdown, gridExtra, ggthemes

Imports: ggplot2, reshape2, dplyr, stats, ggpubr, purrr, iNEXT.3D

Depends: R (>= 4.0)
Imports: stats, magrittr, ggplot2, abind, iNEXT.3D, future.apply,
tibble, dplyr, tidytree, tidyr, phyclust, ape
Suggests: testthat, knitr, rmarkdown, ggthemes

Depends: R (>= 3.5.0)
Imports: broom, cli, dplyr (>= 0.7.0), generics, ggplot2, glue (>=
1.3.0), grDevices, lifecycle, magrittr, methods, patchwork,
purrr, rlang (>= 0.2.0), tibble, tidyr, vctrs
Suggests: covr, devtools (>= 1.12.0), fs, knitr, nycflights13, parsnip,
rmarkdown, stringr, testthat (>= 3.0.0), vdiffr (>= 1.0.0)

Depends: R (>= 4.1.0)
Imports: cli, dplyr, doParallel, foreach, ggnetwork, ggplot2, ggraph,
Matrix, methods, parallel, patchwork, pbapply, purrr, Rcpp,
RcppArmadillo, RcppParallel, stats, utils
LinkingTo: Rcpp, RcppArmadillo, RcppParallel
Suggests: ComplexHeatmap, circlize, gtools, gganimate, ggExtra,
ggpointdensity, ggpubr, igraph, network, plotly, precrec, pROC,
testthat (>= 3.0.0), tidygraph, RColorBrewer, Rtsne,
RTransferEntropy, uwot, viridis

Depends: R(>= 3.2)
Imports: data.table, magrittr, Rcpp, stats, utils
LinkingTo: Rcpp
Suggests: covr, knitr, rmarkdown, testthat, xplorerr

Suggests: testthat (>= 3.0.0), tibble, tidyverse

Depends: reshape2, ggplot2, stats, utils

Imports: parallel, stats, graphics, grDevices

Imports: readxl, data.table, plotrix, tidyr, ggplot2, xlsx, httr,
jsonlite, GGally, network, stats, RColorBrewer, svglite
Suggests: knitr, rmarkdown,

Imports: dplyr, geigen, ggplot2, ggrepel, methods, ROCR

Imports: igraph (>= 1.0.1), Matrix (>= 1.1-4), methods, utils

Depends: R (>= 2.10)
Imports: igraph, janitor, ranger, coop, foreach, doParallel,
data.table, ggplot2, BiocManager
Suggests: Hmisc (>= 4.3-0), mgcv (>= 1.8-31), nortest (>= 1.0-4), NNS
(>= 0.4.7.1), readr, parallel, shiny, shinythemes,
shinyWidgets, shinyjs, shinycssloaders, colourpicker, magrittr,
DT, knitr, rmarkdown