Suggests: knitr, rmarkdown, tidyverse (>= 1.3.0)

Suggests: knitr, rmarkdown, ggplot2, testthat(>= 2.0.0)

Depends: R (>= 3.5.0)
Imports: parallel, tiff, stats, grDevices, utils, EBImage, httr
Suggests: knitr, rmarkdown, abind, fs, R.rsp

Suggests: knitr (>= 1.9), testthat (>= 0.9.1), rmarkdown (>= 1.12)

Imports: rentrez, xml2, DBI, RMySQL, glue, memoise

Depends: R (>= 4.1.0)
Imports: WGCNA, mlr3, CMplot, ggsci, ROCR, caret, ggplot2, ggpubr,
viridis, ggthemes, ggstatsplot, htmlwidgets, jiebaR, mlr3verse,
parallel, uwot, webshot, wordcloud2,ggforce, igraph, ggnetwork

Depends: pls, glmnet, MASS, st (>= 1.1.6)

Depends: R (>= 3.1.1)
Imports: biomaRt, Biostrings, curl, tibble, jsonlite, data.table (>=
1.9.4), dplyr (>= 0.3.0), readr (>= 1.4.0), downloader (>=
0.3), RCurl (>= 1.95-4.5), XML (>= 3.98-1.1), httr (>= 0.6.1),
stringr (>= 0.6.2), purrr, R.utils, philentropy, withr, fs
Suggests: knitr (>= 1.6), rmarkdown (>= 0.3.3), devtools (>= 1.6.1),
testthat, seqinr, magrittr

Depends: R(>= 3.6)
Imports: minpack.lm, jsonlite, methods, proj4, graphics, stats, utils,
data.table (>= 1.9.8), rappdirs, sf, terra
Suggests: knitr, rmarkdown, prettydoc, testthat, curl, geodata, httr2

Depends: R (>= 4.0.0)
Imports: agricolae, askpass, cowplot, curl, emmeans, farver, ggplot2,
lattice, multcompView, pracma, rlang (>= 1.0.0), scales,
stringi, xml2
Suggests: covr, crayon, knitr, rmarkdown, testthat, vdiffr, withr
Enhances: asreml, ARTool, lme4, nlme, sommer

Depends: R (>= 4.1)
Imports: stats, utils, methods, terra (>= 1.6-33), sp, reshape,
reshape2, abind, foreach, ggplot2, gbm (>= 2.1.3), rpart, MASS,
pROC (>= 1.15.0), PresenceAbsence, dplyr
Suggests: Hmisc, gam, mgcv, earth, maxnet, mda, nnet, randomForest,
xgboost, car, caret, dismo, ENMeval, doParallel, raster,
ggpubr, testthat, knitr, markdown, tidyterra, ggtext

Depends: R (>= 4.2.0), imager, magick, tcltk
Imports: data.table, cluster
Suggests: knitr, rmarkdown, doParallel, kohonen, imagerExtra, GPareto,
foreach

Imports: xgboost, pROC, ggplot2, PropCIs, survival, survminer, mgcv,
onewaytests, car