Suggests: checkmate, pkgload, plotrix, rmarkdown, rprojroot, RUnit,
testthat, tinytest

Depends: R (>= 3.5.0)
Imports: ape (>= 5.6), cli (>= 3.0), cluster, fastmatch (>= 1.1.3), fs,
future, PlotTools, promises, protoclust, Rcpp, Rdpack (>= 0.7),
Rogue (> 2.0.0), shiny (>= 1.6.0), shinyjs, stats, TreeDist (>=
2.6.3), TreeTools (>= 1.10.0),
LinkingTo: Rcpp, TreeTools,
Suggests: knitr, phangorn (>= 2.2.1), Quartet, readxl, rmarkdown,
shinytest, spelling, testthat, vdiffr (>= 1.0.0),

Suggests: gbm, jsonlite, lightgbm, randomForest, ranger, scales,
survival, testthat, xgboost

Suggests: testthat (>= 3.0.0), treesitter.r

Suggests: testthat (>= 3.0.0), treesitter

Suggests: devtools, ggpubr (>= 0.6.0), knitr, rmarkdown, testthat (>=
3.0.0)

Depends: R (>= 3.4.0), ape, ade4
Imports: adegenet, adegraphics, combinat, compiler, distory, fields,
htmlwidgets, MASS, methods, parallel, phangorn, phytools, Rcpp,
rgl, RLumShiny, scatterD3, shiny, shinyBS, utils
LinkingTo: Rcpp
Suggests: ggplot2, igraph, knitr, pander, RColorBrewer, reshape2,
rmarkdown, sf, testthat

Suggests: phyloTop, testthat, DDD, geiger, nLTT, castor, adephylo,
ggplot2, tibble, picante, treebalance, RPANDA, lintr,
rmarkdown, knitr, igraph, RSpectra, Matrix, abcrf, pheatmap

Depends: R (>= 3.4.0), ape (>= 5.6),
Imports: bit64, lifecycle, colorspace, fastmatch (>= 1.1.3), methods,
PlotTools, RCurl, R.cache, Rdpack (>= 2.3),
LinkingTo: Rcpp
Suggests: spelling, knitr, phangorn (>= 2.2.1), purrr, Rcpp (>= 1.0.8),
rlang, rmarkdown, testthat (>= 3.0), vdiffr (>= 1.0.0),

Depends: R (>= 3.4.0)
Imports: dplyr, purrr, grid, htmltools, DistributionUtils, grDevices,
gtable, digest, jsonlite, ggplot2 (>= 3.2.1), base64enc,
htmlwidgets, graphics, progress, utils, knitr, webshot,
autocogs, tidyr, rlang
Suggests: plotly, testthat, covr, gapminder, rmarkdown, shiny,
housingData

Depends: R (>= 3.6.0)
Imports: curl, httr (>= 1.4.0), jsonlite (>= 1.7.0)
Suggests: knitr, rmarkdown, tibble, testthat

Suggests: testthat (>= 3.0.0), clipr, vcr (>= 0.6.0), knitr, rmarkdown