Imports: methods, rlang, tibble (>= 3.0.0), vctrs, withr
Suggests: covr, dm, DiagrammeR, DiagrammeRsvg, RProtoBuf, testthat

Depends: ggplot2, RColorBrewer, reshape, lavaan, R (>= 3.0.0)

Imports: ggplot2 (>= 3.2.0)
Suggests: tidyverse, qpdf, scales, purrr, forcats, dplyr, knitr,
rmarkdown, ggalluvial, ggrepel, testthat (>= 3.0.0)

Depends: R (>= 4.3.0)
Imports: Rcpp (>= 1.0.5), Matrix, abind, methods, lifecycle, generics,
tibble, ggplot2
LinkingTo: Rcpp, RcppArmadillo (>= 0.10.7.5.0), RcppProgress, splines2
(>= 0.4.4), rcpptimer (>= 1.2.0)
Suggests: testthat (>= 3.0.0), gamlss.dist, knitr, rmarkdown, dplyr,
rcpptimer (>= 1.2.0),

Suggests: knitr (>= 1.15.1), rmarkdown (>= 1.3), R.rsp (>= 0.40.0),
testthat (>= 1.0.2), BayesianTools

Depends: R (>= 4.0)
Imports: htmlwidgets (>= 0.3.2), rlang (>= 1.1.0), vctrs
Suggests: htmltools, knitr, rmarkdown, shiny, testthat (>= 3.0.0)

Imports: igraph, infotheo, maftools, patchwork, pathwayTMB, stats,
survival, survminer, utils

Suggests: Rcpp, testthat (>= 3.0.0), withr

Suggests: graphics, tcltk, beepr, cli, crayon, pbmcapply, progress,
purrr, foreach, plyr, doFuture, future, future.apply, furrr,
RPushbullet, rstudioapi, shiny, commonmark, base64enc, tools

Suggests: testthat (>= 3.0.0), spelling, knitr, rmarkdown, sf

Depends: R (>= 3.0)
Imports: Rcpp, ggplot2, stats, graphics, vegan, deldir, geometry,
GeneralizedUmatrix, shiny, shinyjs, shinythemes, plotly,
grDevices
LinkingTo: Rcpp
Suggests: DataVisualizations, fastICA, tsne, FastKNN, MASS, pcaPP,
spdep, pracma, grid, mgcv, fields, png, reshape2, Rtsne,
methods, dendextend, umap, uwot, DatabionicSwarm, parallelDist,
parallel

Depends: R (>= 3.5.0)
Imports: stats, utils, incidence (>= 1.4.1), ggplot2, methods
Suggests: testthat, roxygen2, knitr, rmarkdown, outbreaks, magrittr,
distcrete, svglite, EpiEstim

Imports: lpSolveAPI, triangle, kappalab, igraph

Suggests: forcats, here (>= 0.1), testthat (>= 2.3.2)

Suggests: foreign, feather, reshape, plyr, formatR, qs, stringr,
ggplot2, lubridate, log4r (>= 0.1-5), DBI, RMySQL, RSQLite,
gdata, RODBC, RJDBC, readxl, xlsx, tuneR, pixmap, data.table,
RPostgreSQL, GetoptLong, whisker, testthat (>= 3.0.0),
reticulate