Imports: ellipse, grDevices, graphics, stats

Depends: R (>= 3.6.0)
Imports: broom, tibble, dplyr, rlang, stats, purrr
Suggests: knitr, rmarkdown, testthat (>= 2.1.0)

Imports: cluster, stats, grDevices, class

Imports: ggplot2, pheatmap, graphics, Seurat, GSVA, stats, utils,
downloader, pcaMethods, grDevices, gProfileR, limSolve,
gprofiler2, pbapply, ADAPTS, reshape,

Imports: alakazam (>= 1.3.0), shazam (>= 1.2.0), data.table,
doParallel, dplyr (>= 1.0), foreach, methods, Rcpp (>=
0.12.12), rlang, scales, stats, stringi, tidyr (>= 1.0)

Suggests: CIARA, rmarkdown, testthat (>= 3.0.0), knitr

Depends: R (>= 3.5.0)
Imports: doParallel, foreach, iterators, parallel

Depends: R (>= 3.5.0)
Imports: data.table (>= 1.10.0), ggplot2, gridExtra, foreach,
doParallel, parallel, openxlsx, stringi, cli, xml2, xefun (>=
0.1.3)
Suggests: knitr, rmarkdown, pkgdown, testthat

Imports: car, e1071, gbm, partykit, randomForest, reshape2, sqldf,
stringr, stats, ggplot2, utils

Imports: Rcpp (>= 1.0.12), Rfast, igraph
LinkingTo: Rcpp
Suggests: knitr, rmarkdown, testthat (>= 3.0.0)

Depends: R (>= 3.5.0)
Imports: MCMCpack, optimx, FixedPoint, Rdpack, Rcpp (>= 1.0.9),
methods, stats, R6, utils, rlang (>= 1.1.0)
LinkingTo: Rcpp (>= 1.0.9), RcppEigen (>= 0.3.3.7)
Suggests: testthat, ks, movMF, cubature, simdd, numDeriv
Enhances: RcppEigen (>= 0.3.3.7), RcppXPtrUtils

Depends: R (>= 3.5.0)
Imports: checkmate (>= 1.9.1), Rcpp (>= 1.0.0)
LinkingTo: Rcpp
Suggests: knitr, rmarkdown, testthat (>= 2.0.0), cluster

Imports: utils, combinat, limSolve, RSpectra, igraph, igraphdata, stats

Depends: R (>= 3.00)
Imports: Rcpp (>= 0.12.0), methods, MASS, knitr
LinkingTo: Rcpp, RcppArmadillo
Suggests: gsl (>= 1.8-3), hypergeo(>= 1.0), rmarkdown, testthat, crch,
ggplot2

Depends: R (>= 3.6)
Imports: data.table, ggdist (>= 3.2.0), ggplot2 (>= 3.4.0), lifecycle,
methods, rlang, scoringRules, stats
Suggests: kableExtra, knitr, magrittr, rmarkdown, testthat, vdiffr

Imports: Matrix, survival, pracma, foreach, doParallel, parallel, Rcpp

Imports: cli, methods, irlba, igraph, RANN, Matrix, pbapply,
RhpcBLASctl