Imports: dplyr, rrapply, tibble, yaml, magrittr, rlang

Imports: graphics, stats, BayesFactor, MVN, utils

Depends: R (>= 3.6.0)
Suggests: testthat (>= 2.1.0), sandwich, knitr, rmarkdown, spelling,
formatR

Suggests: knitr, rmarkdown, bookdown, testthat (>= 3.0.0), vdiffr

Depends: R (>= 3.2.3)
LinkingTo: BH (>= 1.55), Rcpp, RcppProgress (>= 0.2.1)

Imports: stringr, gprofiler2, scales, ggplot2, gridExtra, ggpubr,
signatureSearch, signatureSearchData

Imports: methods, purrr, rlang, R6, pryr

Imports: dplyr, Formula, vctrs, pillar, glue, Rdpack, tidyselect

Imports: msm, mirt, simex, mvtnorm, ggplot2

Depends: R (>= 3.0.2), lme4, stats4, plyr, data.table
Imports: ggplot2 (>= 2.0.0), methods, graphics, grDevices, stats, utils

Imports: fitdistrplus, stats, MASS, e1071

Suggests: xts, vars, magrittr, testthat (>= 3.0.0), knitr, rmarkdown,
covr

Depends: R (>= 3.4.0)
LinkingTo: RcppArmadillo (>= 0.7.100.3.1), BH (>= 1.55), RcppProgress
(>= 0.2.1), Rcpp

Depends: R (>= 3.2)
Imports: dplR, dplyr, forcats, ggplot2, ggpubr, magrittr, purrr, rlang,
stats, tidyr, glue, tibble
Suggests: testthat, vdiffr, knitr, rmarkdown

Imports: utils, stats, formula.tools(>= 1.7.1)

Imports: ggplot2 (>= 2.0.0), methods, stats, graphics, grDevices

Imports: Rcpp (>= 0.11.1), lattice, robustbase
LinkingTo: Rcpp

Imports: sgs, caret, methods, stats, grDevices, graphics, faux, Matrix
Suggests: SGL, gglasso, glmnet, testthat

Depends: R (>= 3.3.1), Biobase, MLInterfaces
Imports: genefilter, ALL, grDevices, graphics, stats, utils

Depends: R (>= 3.5.0)
Imports: assertthat, magrittr, stringr, utils
Suggests: biomaRt, conflicted, dplyr, edgeR, GenomicRanges, glue,
knitr, rmarkdown, testthat

Depends: R (>= 3.5.0)
Imports: assertthat, DGEobj (>= 1.0.3), dplyr, methods, stats, stringr
Suggests: biomaRt, canvasXpress, conflicted, edgeR, glue, ggplot2, IHW,
limma, knitr, qvalue, RNASeqPower, rmarkdown, statmod, sva,
testthat, zFPKM

Suggests: ggplot2, knitr, rmarkdown, dplyr, maps, R.rsp, testthat

Imports: nloptr (>= 1.2.1), COMPoissonReg

Depends: R (>= 2.10)
Imports: GPFDA, Rcpp, factor.switching, mvtnorm, combinat, coda,
corrplot, pheatmap, stats
LinkingTo: Rcpp, RcppArmadillo
Suggests: knitr, rmarkdown, testthat (>= 3.0.0)