Imports: R6, glue, rstudioapi, crayon, fs, stringr, utils, git2r, cli,
renv

Depends: R (>= 3.5.0), lpSolve, colorspace

Depends: R (>= 4.1)
Imports: dplyr, ggplot2, rlang, stats, tibble, tidyr

Imports: pheatmap, pbapply, psych, ROCR, reshape2, dplyr, grDevices,
stats, methods, viridisLite

Suggests: testthat, covr, knitr, rmarkdown, spelling

Depends: R (>= 3.5.0)
Imports: Rcpp (>= 1.0.10), Matrix, Seurat, DescTools, ProFAST, furrr,
future, ggplot2, ggrepel, grDevices, irlba, pbapply, progress,
scater, stats, ade4, methods
LinkingTo: Rcpp, RcppArmadillo
Suggests: knitr, rmarkdown, cowplot, scales, tibble, dplyr, msigdbr

Depends: R (>= 3.3.2)
Imports: mgcv, dplyr, tidyr, tibble, ggplot2, shiny, markdown

Depends: lme4(>= 1.1-6), methods, Matrix, stats4, nlme

Depends: R (>= 3.5.0)
Imports: assertthat (>= 0.2.1), parallel (>= 3.5.1), pbmcapply (>=
1.4.1), ggplot2 (>= 3.1.1), gridExtra (>= 2.3)
Suggests: smoof, knitr, rmarkdown, car, dplyr, pkgdown

Depends: R (>= 2.10)
Imports: dplyr, lubridate, magrittr, MASS, stats, VGAM, plotly, zoo, DT
Suggests: knitr, rmarkdown, testthat (>= 3.0.0)

Suggests: cubature, testthat, knitr, rmarkdown

Imports: ggplot2, dplyr, forcats, suncalc, ggimage, gggibbous

Imports: dplyr, forcats, gggibbous, ggimage, ggplot2, suncalc

Suggests: missForest, rpart, survival, xtable, ranger

Depends: R (>= 2.10)
Imports: boot, dplyr, ggplot2, ggpubr, ggExtra, gridExtra, Hmisc,
mstate, rms, stats, survival, tidyr, VGAM
Suggests: covr, knitr, rmarkdown, R.rsp, testthat (>= 3.0.0)

Depends: R (>= 3.5.0)
Imports: BB, cmaes, DEoptim, dfoptim, GenSA, graphics, minqa, optimx,
foreach, lbfgsb3c, parallel, pso, rgenoud, soma, stats,
stringr, utils
Suggests: deSolve, ibm, knitr, rmarkdown, testthat (>= 3.0.0)

Imports: GPfit, gelnet, kernlab, randtoolbox

Suggests: ReGenesees, testthat (>= 2.1.0)

Imports: Rcpp, ggplot2, tibble, dplyr, tidyr, sp, methods, base, stats,
magrittr, rlang, tidyselect

Depends: R (>= 3.5.0), rms, ggplot2
Imports: grDevices, graphics, methods, stats, utils, survival, Hmisc,
bookdown, rstudioapi
Suggests: knitr, rmarkdown, mgcv, MASS, magrittr, Matrix