Cell DiffErential Expression by Pooling ('CellDEEP') R package CellDEEP version 1.0.1 Pool cells together before running differentially expression (DE) analysis. Tell 'CellDEEP' how many cells you want to pool together (which shall be determined by the overall cell number of data), then run DE analysis. Cheng et al. (2026) <doi:10.64898/2026.03.09.710522>. Software Depends: R (>= 3.5) Imports: Seurat Suggests: knitr, rmarkdown, testthat (>= 3.2.3) Yiyi Cheng <2593244c@student.gla.ac.uk> Comprehensive R Archive Network (CRAN) Yiyi Cheng [aut, cre] (ORCID: <https://orcid.org/0009-0005-3329-6842>) GPL (>= 3) 2026-03-29 application/tgz https://CRAN.R-project.org/package=CellDEEP doi:10.32614/CRAN.package.CellDEEP