CRAN Package Check Results for Maintainer ‘Yue Pan <yuep027 at gmail.com>’

Last updated on 2024-05-02 08:02:39 CEST.

Package	NOTE	OK
scpoisson	9	4

Package scpoisson

Current CRAN status: NOTE: 9, OK: 4

Version: 0.0.1
Check: Rd files
Result: NOTE checkRd: (-1) HclustDepart.Rd:23: Lost braces; missing escapes or markup? 23 | \item{\code{res2}}: {a data frame contains two columns: names (cell names) and clusters (cluster label)} | ^ checkRd: (-1) HclustDepart.Rd:24-26: Lost braces 24 | \item{\code{sigclust_p}}: {a matrix with cells to cluster as rows, split index as columns, | ^ checkRd: (-1) HclustDepart.Rd:27-29: Lost braces 27 | \item{\code{sigclust_z}}: {a matrix with cells to cluster as rows, split index as columns, | ^ checkRd: (-1) LouvainDepart.Rd:38: Lost braces; missing escapes or markup? 38 | \item{\code{sdata}}: {a Seurat object} | ^ checkRd: (-1) LouvainDepart.Rd:39-40: Lost braces 39 | \item{\code{tsne_data}}: {a matrix containing t-SNE dimension reduction results, | ^ checkRd: (-1) LouvainDepart.Rd:41-42: Lost braces 41 | \item{\code{umap_data}}: {a matrix containing UMAP dimension reduction results, | ^ checkRd: (-1) LouvainDepart.Rd:43: Lost braces; missing escapes or markup? 43 | \item{\code{res_clust}}: {a data frame contains two columns: names (cell names) and clusters (cluster label)} | ^ checkRd: (-1) sigp.Rd:19: Lost braces; missing escapes or markup? 19 | \item{\code{p}}: {p-value for the first split} | ^ checkRd: (-1) sigp.Rd:20: Lost braces; missing escapes or markup? 20 | \item{\code{z}}: {z-score for the first split} | ^ checkRd: (-1) sigp.Rd:21: Lost braces 21 | \item{\code{shc_result}}: {a \code{shc} S3-object as defined in sigclust2 package} | ^ checkRd: (-1) sigp.Rd:22: Lost braces; missing escapes or markup? 22 | \item{\code{clust2}}: {a vector with group index for each cell} | ^ checkRd: (-1) sigp.Rd:23: Lost braces; missing escapes or markup? 23 | \item{\code{clust_dat}}: {a matrix of data representation used as input for hierarchical clustering} | ^ Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-windows-x86_64