CRAN Package Check Results for Maintainer ‘Thibaut Jombart <thibautjombart at gmail.com>’

Last updated on 2025-04-12 20:52:26 CEST.

Package ERROR NOTE OK
earlyR 14
epitrix 4 10
projections 15
trendeval 9 6
trending 1 14

Package earlyR

Current CRAN status: NOTE: 14

Version: 0.0.5
Check: Rd files
Result: NOTE checkRd: (-1) plot.earlyR.Rd:34-46: Lost braces 34 | if (require(incidence)) { | ^ Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-gcc, r-devel-macos-arm64, r-devel-macos-x86_64, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64

Version: 0.0.5
Check: LazyData
Result: NOTE 'LazyData' is specified without a 'data' directory Flavors: r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64

Package epitrix

Current CRAN status: NOTE: 4, OK: 10

Version: 0.4.0
Check: Rd cross-references
Result: NOTE Found the following Rd file(s) with Rd \link{} targets missing package anchors: fit_disc_gamma.Rd: distcrete gamma_tools.Rd: distcrete Please provide package anchors for all Rd \link{} targets not in the package itself and the base packages. Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64

Package projections

Current CRAN status: OK: 15

Package trendeval

Current CRAN status: ERROR: 9, OK: 6

Additional issues

M1mac

Version: 0.1.0
Check: Rd cross-references
Result: NOTE Found the following Rd file(s) with Rd \link{} targets missing package anchors: calculate_mae.Rd: trending_model calculate_rmse.Rd: trending_model calculate_rsq.Rd: trending_model Please provide package anchors for all Rd \link{} targets not in the package itself and the base packages. Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64

Version: 0.1.0
Check: examples
Result: ERROR Running examples in ‘trendeval-Ex.R’ failed The error most likely occurred in: > base::assign(".ptime", proc.time(), pos = "CheckExEnv") > ### Name: evaluate_resampling > ### Title: Resampling approach for model evaluation > ### Aliases: evaluate_resampling evaluate_resampling.default > ### evaluate_resampling.trending_model evaluate_resampling.list > > ### ** Examples > > x <- rnorm(100, mean = 0) > y <- rpois(n = 100, lambda = exp(x + 1)) > dat <- data.frame(x = x, y = y) > model <- trending::glm_model(y ~ x, poisson) > models <- list( + poisson_model = trending::glm_model(y ~ x, poisson), + linear_model = trending::lm_model(y ~ x) + ) > > evaluate_resampling(model, dat) Error in `rsample::vfold_cv()`: ! Leave-one-out cross-validation is not supported by this function. ✖ You set `v` to `nrow(data)`, which would result in a leave-one-out cross-validation. ℹ Use `loo_cv()` in this case. Backtrace: ▆ 1. ├─trendeval::evaluate_resampling(model, dat) 2. └─trendeval:::evaluate_resampling.trending_model(model, dat) 3. └─rsample::vfold_cv(data, v = v, repeats = repeats) 4. └─rsample:::vfold_splits(...) 5. └─rsample:::check_v(v, n, prevent_loo = prevent_loo, call = rlang::caller_env()) 6. └─cli::cli_abort(...) 7. └─rlang::abort(...) Execution halted Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-patched-linux-x86_64, r-release-linux-x86_64

Version: 0.1.0
Check: examples
Result: ERROR Running examples in ‘trendeval-Ex.R’ failed The error most likely occurred in: > ### Name: evaluate_resampling > ### Title: Resampling approach for model evaluation > ### Aliases: evaluate_resampling evaluate_resampling.default > ### evaluate_resampling.trending_model evaluate_resampling.list > > ### ** Examples > > x <- rnorm(100, mean = 0) > y <- rpois(n = 100, lambda = exp(x + 1)) > dat <- data.frame(x = x, y = y) > model <- trending::glm_model(y ~ x, poisson) > models <- list( + poisson_model = trending::glm_model(y ~ x, poisson), + linear_model = trending::lm_model(y ~ x) + ) > > evaluate_resampling(model, dat) Error in `rsample::vfold_cv()`: ! Leave-one-out cross-validation is not supported by this function. ✖ You set `v` to `nrow(data)`, which would result in a leave-one-out cross-validation. ℹ Use `loo_cv()` in this case. Backtrace: ▆ 1. ├─trendeval::evaluate_resampling(model, dat) 2. └─trendeval:::evaluate_resampling.trending_model(model, dat) 3. └─rsample::vfold_cv(data, v = v, repeats = repeats) 4. └─rsample:::vfold_splits(...) 5. └─rsample:::check_v(v, n, prevent_loo = prevent_loo, call = rlang::caller_env()) 6. └─cli::cli_abort(...) 7. └─rlang::abort(...) Execution halted Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-release-windows-x86_64, r-oldrel-windows-x86_64

Current CRAN status: NOTE: 1, OK: 14

Version: 0.1.0
Check: package dependencies
Result: NOTE Package suggested but not available for checking: ‘brms’ Flavor: r-oldrel-macos-x86_64

Version: 0.1.0
Check: Rd cross-references
Result: NOTE Package unavailable to check Rd xrefs: ‘brms’ Flavor: r-oldrel-macos-x86_64

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