Last updated on 2025-12-04 09:50:33 CET.
| Package | ERROR | OK |
|---|---|---|
| CytoProfile | 2 | 11 |
Current CRAN status: ERROR: 2, OK: 11
Version: 0.2.2
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
--- re-building ‘getting_started.Rmd’ using rmarkdown
Warning: ggrepel: 6 unlabeled data points (too many overlaps). Consider increasing max.overlaps
Warning: ggrepel: 2 unlabeled data points (too many overlaps). Consider increasing max.overlaps
Quitting from getting_started.Rmd:316-338 [ML1]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `confusionMatrix.default()`:
! The data must contain some levels that overlap the reference.
---
Backtrace:
▆
1. └─CytoProfile::cyt_xgb(...)
2. ├─caret::confusionMatrix(as.factor(cv_pred_labels), as.factor(actual_labels))
3. └─caret:::confusionMatrix.default(as.factor(cv_pred_labels), as.factor(actual_labels))
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'getting_started.Rmd' failed with diagnostics:
The data must contain some levels that overlap the reference.
--- failed re-building ‘getting_started.Rmd’
SUMMARY: processing the following file failed:
‘getting_started.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc
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