CRAN Package Check Results for Maintainer ‘Ron Keizer <ron at insight-rx.com>’

Last updated on 2024-08-16 21:49:36 CEST.

Package	ERROR	OK
clinPK		13
PKPDsim	9	4

Package clinPK

Current CRAN status: OK: 13

Package PKPDsim

Current CRAN status: ERROR: 9, OK: 4

Version: 1.3.0
Check: tests
Result: ERROR Running ‘testthat.R’ [195s/240s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > library(testthat) > library(PKPDsim) > > test_check("PKPDsim") Simulating 3 individuals. [ FAIL 1 | WARN 2 | SKIP 28 | PASS 396 ] ══ Skipped tests (28) ══════════════════════════════════════════════════════════ • On CRAN (28): 'test_advan_with_auc.R:71:3', 'test_advan_with_auc.R:84:3', 'test_advan_with_auc.R:106:3', 'test_advan_with_auc.R:131:3', 'test_advan_with_auc.R:153:3', 'test_advan_with_covariates.R:2:3', 'test_bioav_def.R:8:3', 'test_bioav_def.R:27:3', 'test_calc_ss_analytic.R:74:3', 'test_calc_ss_analytic.R:100:3', 'test_calc_ss_analytic.R:110:3', 'test_calc_ss_analytic.R:119:3', 'test_cmt_mapping.R:31:3', 'test_get_var_y.R:25:3', 'test_get_var_y.R:49:3', 'test_get_var_y.R:93:3', 'test_get_var_y.R:132:3', 'test_iov.R:37:3', 'test_model_from_api.R:13:3', 'test_multi_obs.R:168:3', 'test_new_ode_model.R:2:3', 'test_new_ode_model.R:76:3', 'test_new_ode_model.R:137:3', 'test_parameters_table.R:2:3', 'test_pkpd_combined.R:2:3', 'test_sim_lagtime.R:2:3', 'test_t_init.R:8:3', 'test_timevar_cov.R:2:3' ══ Failed tests ════════════════════════════════════════════════════════════════ ── Failure ('test_iov.R:143:3'): error is not invoked when using parameters_table ── `... <- NULL` produced warnings. [ FAIL 1 | WARN 2 | SKIP 28 | PASS 396 ] Error: Test failures Execution halted Flavor: r-devel-linux-x86_64-debian-clang

Version: 1.3.0
Check: tests
Result: ERROR Running ‘testthat.R’ [145s/181s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > library(testthat) > library(PKPDsim) > > test_check("PKPDsim") Simulating 3 individuals. [ FAIL 1 | WARN 2 | SKIP 28 | PASS 396 ] ══ Skipped tests (28) ══════════════════════════════════════════════════════════ • On CRAN (28): 'test_advan_with_auc.R:71:3', 'test_advan_with_auc.R:84:3', 'test_advan_with_auc.R:106:3', 'test_advan_with_auc.R:131:3', 'test_advan_with_auc.R:153:3', 'test_advan_with_covariates.R:2:3', 'test_bioav_def.R:8:3', 'test_bioav_def.R:27:3', 'test_calc_ss_analytic.R:74:3', 'test_calc_ss_analytic.R:100:3', 'test_calc_ss_analytic.R:110:3', 'test_calc_ss_analytic.R:119:3', 'test_cmt_mapping.R:31:3', 'test_get_var_y.R:25:3', 'test_get_var_y.R:49:3', 'test_get_var_y.R:93:3', 'test_get_var_y.R:132:3', 'test_iov.R:37:3', 'test_model_from_api.R:13:3', 'test_multi_obs.R:168:3', 'test_new_ode_model.R:2:3', 'test_new_ode_model.R:76:3', 'test_new_ode_model.R:137:3', 'test_parameters_table.R:2:3', 'test_pkpd_combined.R:2:3', 'test_sim_lagtime.R:2:3', 'test_t_init.R:8:3', 'test_timevar_cov.R:2:3' ══ Failed tests ════════════════════════════════════════════════════════════════ ── Failure ('test_iov.R:143:3'): error is not invoked when using parameters_table ── `... <- NULL` produced warnings. [ FAIL 1 | WARN 2 | SKIP 28 | PASS 396 ] Error: Test failures Execution halted Flavor: r-devel-linux-x86_64-debian-gcc

Version: 1.3.0
Check: dependencies in R code
Result: NOTE Namespace in Imports field not imported from: ‘BH’ All declared Imports should be used. Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc

Version: 1.3.0
Check: tests
Result: ERROR Running ‘testthat.R’ [334s/402s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > library(testthat) > library(PKPDsim) > > test_check("PKPDsim") Simulating 3 individuals. [ FAIL 1 | WARN 2 | SKIP 28 | PASS 396 ] ══ Skipped tests (28) ══════════════════════════════════════════════════════════ • On CRAN (28): 'test_advan_with_auc.R:71:3', 'test_advan_with_auc.R:84:3', 'test_advan_with_auc.R:106:3', 'test_advan_with_auc.R:131:3', 'test_advan_with_auc.R:153:3', 'test_advan_with_covariates.R:2:3', 'test_bioav_def.R:8:3', 'test_bioav_def.R:27:3', 'test_calc_ss_analytic.R:74:3', 'test_calc_ss_analytic.R:100:3', 'test_calc_ss_analytic.R:110:3', 'test_calc_ss_analytic.R:119:3', 'test_cmt_mapping.R:31:3', 'test_get_var_y.R:25:3', 'test_get_var_y.R:49:3', 'test_get_var_y.R:93:3', 'test_get_var_y.R:132:3', 'test_iov.R:37:3', 'test_model_from_api.R:13:3', 'test_multi_obs.R:168:3', 'test_new_ode_model.R:2:3', 'test_new_ode_model.R:76:3', 'test_new_ode_model.R:137:3', 'test_parameters_table.R:2:3', 'test_pkpd_combined.R:2:3', 'test_sim_lagtime.R:2:3', 'test_t_init.R:8:3', 'test_timevar_cov.R:2:3' ══ Failed tests ════════════════════════════════════════════════════════════════ ── Failure ('test_iov.R:143:3'): error is not invoked when using parameters_table ── `... <- NULL` produced warnings. [ FAIL 1 | WARN 2 | SKIP 28 | PASS 396 ] Error: Test failures Execution halted Flavor: r-devel-linux-x86_64-fedora-clang

Version: 1.3.0
Check: tests
Result: ERROR Running ‘testthat.R’ [412s/537s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > library(testthat) > library(PKPDsim) > > test_check("PKPDsim") Simulating 3 individuals. [ FAIL 1 | WARN 2 | SKIP 28 | PASS 396 ] ══ Skipped tests (28) ══════════════════════════════════════════════════════════ • On CRAN (28): 'test_advan_with_auc.R:71:3', 'test_advan_with_auc.R:84:3', 'test_advan_with_auc.R:106:3', 'test_advan_with_auc.R:131:3', 'test_advan_with_auc.R:153:3', 'test_advan_with_covariates.R:2:3', 'test_bioav_def.R:8:3', 'test_bioav_def.R:27:3', 'test_calc_ss_analytic.R:74:3', 'test_calc_ss_analytic.R:100:3', 'test_calc_ss_analytic.R:110:3', 'test_calc_ss_analytic.R:119:3', 'test_cmt_mapping.R:31:3', 'test_get_var_y.R:25:3', 'test_get_var_y.R:49:3', 'test_get_var_y.R:93:3', 'test_get_var_y.R:132:3', 'test_iov.R:37:3', 'test_model_from_api.R:13:3', 'test_multi_obs.R:168:3', 'test_new_ode_model.R:2:3', 'test_new_ode_model.R:76:3', 'test_new_ode_model.R:137:3', 'test_parameters_table.R:2:3', 'test_pkpd_combined.R:2:3', 'test_sim_lagtime.R:2:3', 'test_t_init.R:8:3', 'test_timevar_cov.R:2:3' ══ Failed tests ════════════════════════════════════════════════════════════════ ── Failure ('test_iov.R:143:3'): error is not invoked when using parameters_table ── `... <- NULL` produced warnings. [ FAIL 1 | WARN 2 | SKIP 28 | PASS 396 ] Error: Test failures Execution halted Flavor: r-devel-linux-x86_64-fedora-gcc

Version: 1.3.0
Check: tests
Result: ERROR Running 'testthat.R' [214s] Running the tests in 'tests/testthat.R' failed. Complete output: > library(testthat) > library(PKPDsim) > > test_check("PKPDsim") Simulating 3 individuals. [ FAIL 1 | WARN 2 | SKIP 28 | PASS 396 ] ══ Skipped tests (28) ══════════════════════════════════════════════════════════ • On CRAN (28): 'test_advan_with_auc.R:71:3', 'test_advan_with_auc.R:84:3', 'test_advan_with_auc.R:106:3', 'test_advan_with_auc.R:131:3', 'test_advan_with_auc.R:153:3', 'test_advan_with_covariates.R:2:3', 'test_bioav_def.R:8:3', 'test_bioav_def.R:27:3', 'test_calc_ss_analytic.R:74:3', 'test_calc_ss_analytic.R:100:3', 'test_calc_ss_analytic.R:110:3', 'test_calc_ss_analytic.R:119:3', 'test_cmt_mapping.R:31:3', 'test_get_var_y.R:25:3', 'test_get_var_y.R:49:3', 'test_get_var_y.R:93:3', 'test_get_var_y.R:132:3', 'test_iov.R:37:3', 'test_model_from_api.R:13:3', 'test_multi_obs.R:168:3', 'test_new_ode_model.R:2:3', 'test_new_ode_model.R:76:3', 'test_new_ode_model.R:137:3', 'test_parameters_table.R:2:3', 'test_pkpd_combined.R:2:3', 'test_sim_lagtime.R:2:3', 'test_t_init.R:8:3', 'test_timevar_cov.R:2:3' ══ Failed tests ════════════════════════════════════════════════════════════════ ── Failure ('test_iov.R:143:3'): error is not invoked when using parameters_table ── `... <- NULL` produced warnings. [ FAIL 1 | WARN 2 | SKIP 28 | PASS 396 ] Error: Test failures Execution halted Flavor: r-devel-windows-x86_64

Version: 1.3.0
Check: tests
Result: ERROR Running ‘testthat.R’ [199s/228s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > library(testthat) > library(PKPDsim) > > test_check("PKPDsim") Simulating 3 individuals. [ FAIL 1 | WARN 2 | SKIP 28 | PASS 396 ] ══ Skipped tests (28) ══════════════════════════════════════════════════════════ • On CRAN (28): 'test_advan_with_auc.R:71:3', 'test_advan_with_auc.R:84:3', 'test_advan_with_auc.R:106:3', 'test_advan_with_auc.R:131:3', 'test_advan_with_auc.R:153:3', 'test_advan_with_covariates.R:2:3', 'test_bioav_def.R:8:3', 'test_bioav_def.R:27:3', 'test_calc_ss_analytic.R:74:3', 'test_calc_ss_analytic.R:100:3', 'test_calc_ss_analytic.R:110:3', 'test_calc_ss_analytic.R:119:3', 'test_cmt_mapping.R:31:3', 'test_get_var_y.R:25:3', 'test_get_var_y.R:49:3', 'test_get_var_y.R:93:3', 'test_get_var_y.R:132:3', 'test_iov.R:37:3', 'test_model_from_api.R:13:3', 'test_multi_obs.R:168:3', 'test_new_ode_model.R:2:3', 'test_new_ode_model.R:76:3', 'test_new_ode_model.R:137:3', 'test_parameters_table.R:2:3', 'test_pkpd_combined.R:2:3', 'test_sim_lagtime.R:2:3', 'test_t_init.R:8:3', 'test_timevar_cov.R:2:3' ══ Failed tests ════════════════════════════════════════════════════════════════ ── Failure ('test_iov.R:143:3'): error is not invoked when using parameters_table ── `... <- NULL` produced warnings. [ FAIL 1 | WARN 2 | SKIP 28 | PASS 396 ] Error: Test failures Execution halted Flavor: r-patched-linux-x86_64

Version: 1.3.0
Check: tests
Result: ERROR Running ‘testthat.R’ [202s/237s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > library(testthat) > library(PKPDsim) > > test_check("PKPDsim") Simulating 3 individuals. [ FAIL 1 | WARN 2 | SKIP 28 | PASS 396 ] ══ Skipped tests (28) ══════════════════════════════════════════════════════════ • On CRAN (28): 'test_advan_with_auc.R:71:3', 'test_advan_with_auc.R:84:3', 'test_advan_with_auc.R:106:3', 'test_advan_with_auc.R:131:3', 'test_advan_with_auc.R:153:3', 'test_advan_with_covariates.R:2:3', 'test_bioav_def.R:8:3', 'test_bioav_def.R:27:3', 'test_calc_ss_analytic.R:74:3', 'test_calc_ss_analytic.R:100:3', 'test_calc_ss_analytic.R:110:3', 'test_calc_ss_analytic.R:119:3', 'test_cmt_mapping.R:31:3', 'test_get_var_y.R:25:3', 'test_get_var_y.R:49:3', 'test_get_var_y.R:93:3', 'test_get_var_y.R:132:3', 'test_iov.R:37:3', 'test_model_from_api.R:13:3', 'test_multi_obs.R:168:3', 'test_new_ode_model.R:2:3', 'test_new_ode_model.R:76:3', 'test_new_ode_model.R:137:3', 'test_parameters_table.R:2:3', 'test_pkpd_combined.R:2:3', 'test_sim_lagtime.R:2:3', 'test_t_init.R:8:3', 'test_timevar_cov.R:2:3' ══ Failed tests ════════════════════════════════════════════════════════════════ ── Failure ('test_iov.R:143:3'): error is not invoked when using parameters_table ── `... <- NULL` produced warnings. [ FAIL 1 | WARN 2 | SKIP 28 | PASS 396 ] Error: Test failures Execution halted Flavor: r-release-linux-x86_64

Version: 1.3.0
Check: tests
Result: ERROR Running 'testthat.R' [190s] Running the tests in 'tests/testthat.R' failed. Complete output: > library(testthat) > library(PKPDsim) > > test_check("PKPDsim") Simulating 3 individuals. [ FAIL 1 | WARN 2 | SKIP 28 | PASS 396 ] ══ Skipped tests (28) ══════════════════════════════════════════════════════════ • On CRAN (28): 'test_advan_with_auc.R:71:3', 'test_advan_with_auc.R:84:3', 'test_advan_with_auc.R:106:3', 'test_advan_with_auc.R:131:3', 'test_advan_with_auc.R:153:3', 'test_advan_with_covariates.R:2:3', 'test_bioav_def.R:8:3', 'test_bioav_def.R:27:3', 'test_calc_ss_analytic.R:74:3', 'test_calc_ss_analytic.R:100:3', 'test_calc_ss_analytic.R:110:3', 'test_calc_ss_analytic.R:119:3', 'test_cmt_mapping.R:31:3', 'test_get_var_y.R:25:3', 'test_get_var_y.R:49:3', 'test_get_var_y.R:93:3', 'test_get_var_y.R:132:3', 'test_iov.R:37:3', 'test_model_from_api.R:13:3', 'test_multi_obs.R:168:3', 'test_new_ode_model.R:2:3', 'test_new_ode_model.R:76:3', 'test_new_ode_model.R:137:3', 'test_parameters_table.R:2:3', 'test_pkpd_combined.R:2:3', 'test_sim_lagtime.R:2:3', 'test_t_init.R:8:3', 'test_timevar_cov.R:2:3' ══ Failed tests ════════════════════════════════════════════════════════════════ ── Failure ('test_iov.R:143:3'): error is not invoked when using parameters_table ── `... <- NULL` produced warnings. [ FAIL 1 | WARN 2 | SKIP 28 | PASS 396 ] Error: Test failures Execution halted Flavor: r-release-windows-x86_64

Version: 1.3.0
Check: tests
Result: ERROR Running 'testthat.R' [286s] Running the tests in 'tests/testthat.R' failed. Complete output: > library(testthat) > library(PKPDsim) > > test_check("PKPDsim") Simulating 3 individuals. [ FAIL 1 | WARN 2 | SKIP 28 | PASS 396 ] ══ Skipped tests (28) ══════════════════════════════════════════════════════════ • On CRAN (28): 'test_advan_with_auc.R:71:3', 'test_advan_with_auc.R:84:3', 'test_advan_with_auc.R:106:3', 'test_advan_with_auc.R:131:3', 'test_advan_with_auc.R:153:3', 'test_advan_with_covariates.R:2:3', 'test_bioav_def.R:8:3', 'test_bioav_def.R:27:3', 'test_calc_ss_analytic.R:74:3', 'test_calc_ss_analytic.R:100:3', 'test_calc_ss_analytic.R:110:3', 'test_calc_ss_analytic.R:119:3', 'test_cmt_mapping.R:31:3', 'test_get_var_y.R:25:3', 'test_get_var_y.R:49:3', 'test_get_var_y.R:93:3', 'test_get_var_y.R:132:3', 'test_iov.R:37:3', 'test_model_from_api.R:13:3', 'test_multi_obs.R:168:3', 'test_new_ode_model.R:2:3', 'test_new_ode_model.R:76:3', 'test_new_ode_model.R:137:3', 'test_parameters_table.R:2:3', 'test_pkpd_combined.R:2:3', 'test_sim_lagtime.R:2:3', 'test_t_init.R:8:3', 'test_timevar_cov.R:2:3' ══ Failed tests ════════════════════════════════════════════════════════════════ ── Failure ('test_iov.R:143:3'): error is not invoked when using parameters_table ── `... <- NULL` produced warnings. [ FAIL 1 | WARN 2 | SKIP 28 | PASS 396 ] Error: Test failures Execution halted Flavor: r-oldrel-windows-x86_64