CRAN Package Check Results for Maintainer ‘Rachel Rosenthal <rachel.rosenthal.14 at ucl.ac.uk>’

Last updated on 2024-05-02 01:57:47 CEST.

Package	ERROR	NOTE	OK
deconstructSigs	4	8	1

Package deconstructSigs

Current CRAN status: ERROR: 4, NOTE: 8, OK: 1

Version: 1.8.0
Check: Rd \usage sections
Result: NOTE Documented arguments not in \usage in Rd file 'getTriContextFraction.Rd': ‘trimer.counts.ref’ Documented arguments not in \usage in Rd file 'norm.it.Rd': ‘trimer.counts’ Functions with \usage entries need to have the appropriate \alias entries, and all their arguments documented. The \usage entries must correspond to syntactically valid R code. See chapter ‘Writing R documentation files’ in the ‘Writing R Extensions’ manual. Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-windows-x86_64

Version: 1.8.0
Check: package dependencies
Result: ERROR Package required but not available: ‘BSgenome.Hsapiens.UCSC.hg19’ See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’ manual. Flavors: r-release-macos-arm64, r-release-macos-x86_64, r-oldrel-macos-x86_64

Version: 1.8.0
Check: package dependencies
Result: ERROR Package required but not available: ‘BSgenome.Hsapiens.UCSC.hg19’ Package suggested but not available for checking: ‘VariantAnnotation’ See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’ manual. Flavor: r-oldrel-macos-arm64