Last updated on 2026-03-10 19:50:28 CET.
| Package | ERROR | NOTE |
|---|---|---|
| panelsummary | 1 | 13 |
Current CRAN status: ERROR: 1, NOTE: 13
Version: 0.1.2.1
Check: DESCRIPTION meta-information
Result: NOTE
Missing dependency on R >= 4.1.0 because package code uses the pipe
|> or function shorthand \(...) syntax added in R 4.1.0.
File(s) using such syntax:
‘add_panels.R’ ‘clean_raw.Rd’ ‘create_means.R’ ‘helper_functions.R’
‘panelsummary.R’ ‘panelsummary_raw.R’
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-macos-arm64, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64
Version: 0.1.2.1
Check: Rd files
Result: NOTE
checkRd: (-1) panelsummary.Rd:112: Lost braces; missing escapes or markup?
112 | \item `"{exp(estimate) * std.error}"
| ^
checkRd: (-1) panelsummary_raw.Rd:90: Lost braces; missing escapes or markup?
90 | \item `"{exp(estimate) * std.error}"
| ^
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-macos-arm64, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64
Version: 0.1.2.1
Check: examples
Result: ERROR
Running examples in 'panelsummary-Ex.R' failed
The error most likely occurred in:
> ### Name: clean_raw
> ### Title: Pass a panelsummary::panelsummary_raw dataframe into
> ### kableExtra::kbl() with typical defaults
> ### Aliases: clean_raw
>
> ### ** Examples
>
>
> ## Cleaning a panelsummary_raw dataframe with clean_raw
>
> ols_1 <- lm(mpg ~ hp + cyl, data = mtcars)
>
> panelsummary_raw(ols_1, ols_1) |> clean_raw()
Error in basename(x) : a character vector argument expected
Calls: clean_raw ... <Anonymous> -> ifelse -> grepl -> is.factor -> basename
Execution halted
Flavor: r-devel-windows-x86_64
Version: 0.1.2.1
Check: tests
Result: ERROR
Running 'testthat.R' [5s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/tests.html
> # * https://testthat.r-lib.org/reference/test_package.html#special-files
>
> library(testthat)
> library(panelsummary)
>
> test_check("panelsummary")
Saving _problems/test-add_panels-17.R
Saving _problems/test-add_panels-34.R
NOTE: 0/2 fixed-effect singletons were removed (2 observations).
NOTE: 0/2 fixed-effect singletons were removed (2 observations).
Saving _problems/test-add_panels-55.R
NOTE: 0/2 fixed-effect singletons were removed (2 observations).
Saving _problems/test-helper_functions-31.R
Saving _problems/test-panelsummary_raw-6.R
Saving _problems/test-panelsummary_raw-14.R
[ FAIL 6 | WARN 0 | SKIP 13 | PASS 7 ]
══ Skipped tests (13) ══════════════════════════════════════════════════════════
• On CRAN (13): 'test-create_means.R:26:3', 'test-create_means.R:36:3',
'test-create_means.R:46:3', 'test-create_means.R:59:3',
'test-create_means.R:69:3', 'test-helper_functions.R:4:3',
'test-helper_functions.R:41:3', 'test-panelsummary.R:4:3',
'test-panelsummary.R:28:3', 'test-panelsummary.R:52:3',
'test-panelsummary.R:75:3', 'test-panelsummary.R:98:3',
'test-panelsummary_raw.R:20:3'
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-add_panels.R:13:3'): add rows works with bold argument ───────
Expected `panelsummary(...)` not to throw any errors.
Actually got a <simpleError> with message:
a character vector argument expected
Backtrace:
▆
1. ├─testthat::expect_error(...) at test-add_panels.R:13:3
2. │ └─testthat:::expect_condition_matching_(...)
3. │ └─testthat:::quasi_capture(...)
4. │ ├─testthat (local) .capture(...)
5. │ │ └─base::withCallingHandlers(...)
6. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
7. └─panelsummary::panelsummary(...)
8. └─base::lapply(...)
9. └─panelsummary (local) FUN(X[[i]], ...)
10. └─modelsummary::modelsummary(...)
11. └─modelsummary:::factory(...)
12. └─modelsummary (local) factory_fun(...)
13. ├─base::isTRUE(tools::file_ext(output_file) == "csv")
14. └─tools::file_ext(output_file)
15. ├─base::ifelse(...)
16. ├─base::grepl("^(.*[^.]+.*)[.]([[:alnum:]]+)$", basename(x))
17. │ └─base::is.factor(x)
18. └─base::basename(x)
── Failure ('test-add_panels.R:30:3'): add rows works with italic argument ─────
Expected `panelsummary(...)` not to throw any errors.
Actually got a <simpleError> with message:
a character vector argument expected
Backtrace:
▆
1. ├─testthat::expect_error(...) at test-add_panels.R:30:3
2. │ └─testthat:::expect_condition_matching_(...)
3. │ └─testthat:::quasi_capture(...)
4. │ ├─testthat (local) .capture(...)
5. │ │ └─base::withCallingHandlers(...)
6. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
7. └─panelsummary::panelsummary(...)
8. └─base::lapply(...)
9. └─panelsummary (local) FUN(X[[i]], ...)
10. └─modelsummary::modelsummary(...)
11. └─modelsummary:::factory(...)
12. └─modelsummary (local) factory_fun(...)
13. ├─base::isTRUE(tools::file_ext(output_file) == "csv")
14. └─tools::file_ext(output_file)
15. ├─base::ifelse(...)
16. ├─base::grepl("^(.*[^.]+.*)[.]([[:alnum:]]+)$", basename(x))
17. │ └─base::is.factor(x)
18. └─base::basename(x)
── Failure ('test-add_panels.R:50:3'): add rows works with bold argument/italic/hline ──
Expected `panelsummary(...)` not to throw any errors.
Actually got a <simpleError> with message:
a character vector argument expected
Backtrace:
▆
1. ├─testthat::expect_error(...) at test-add_panels.R:50:3
2. │ └─testthat:::expect_condition_matching_(...)
3. │ └─testthat:::quasi_capture(...)
4. │ ├─testthat (local) .capture(...)
5. │ │ └─base::withCallingHandlers(...)
6. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
7. └─panelsummary::panelsummary(...)
8. └─base::lapply(...)
9. └─panelsummary (local) FUN(X[[i]], ...)
10. └─modelsummary::modelsummary(...)
11. └─modelsummary:::factory(...)
12. └─modelsummary (local) factory_fun(...)
13. ├─base::isTRUE(tools::file_ext(output_file) == "csv")
14. └─tools::file_ext(output_file)
15. ├─base::ifelse(...)
16. ├─base::grepl("^(.*[^.]+.*)[.]([[:alnum:]]+)$", basename(x))
17. │ └─base::is.factor(x)
18. └─base::basename(x)
── Error ('test-helper_functions.R:30:30'): row indices for each panel appear and are correct::lm ──
Error in `basename(x)`: a character vector argument expected
Backtrace:
▆
1. └─base::lapply(...) at test-helper_functions.R:30:3
2. └─panelsummary (local) FUN(X[[i]], ...)
3. └─modelsummary::modelsummary(x, output = "data.frame") at test-helper_functions.R:30:30
4. └─modelsummary:::factory(...)
5. └─modelsummary (local) factory_fun(...)
6. ├─base::isTRUE(tools::file_ext(output_file) == "csv")
7. └─tools::file_ext(output_file)
8. ├─base::ifelse(...)
9. ├─base::grepl("^(.*[^.]+.*)[.]([[:alnum:]]+)$", basename(x))
10. │ └─base::is.factor(x)
11. └─base::basename(x)
── Error ('test-panelsummary_raw.R:6:3'): panelsummary_raw returns a data.frame, not other object ──
Error in `basename(x)`: a character vector argument expected
Backtrace:
▆
1. └─panelsummary::panelsummary_raw(ols_1, ols_2) at test-panelsummary_raw.R:6:3
2. └─base::lapply(...)
3. └─panelsummary (local) FUN(X[[i]], ...)
4. └─modelsummary::modelsummary(...)
5. └─modelsummary:::factory(...)
6. └─modelsummary (local) factory_fun(...)
7. ├─base::isTRUE(tools::file_ext(output_file) == "csv")
8. └─tools::file_ext(output_file)
9. ├─base::ifelse(...)
10. ├─base::grepl("^(.*[^.]+.*)[.]([[:alnum:]]+)$", basename(x))
11. │ └─base::is.factor(x)
12. └─base::basename(x)
── Error ('test-panelsummary_raw.R:14:3'): panelsummary_raw returns a data.frame, not other object when using lists as inputs ──
Error in `basename(x)`: a character vector argument expected
Backtrace:
▆
1. └─panelsummary::panelsummary_raw(list(ols_1, ols_1), ols_2) at test-panelsummary_raw.R:14:3
2. └─base::lapply(...)
3. └─panelsummary (local) FUN(X[[i]], ...)
4. └─modelsummary::modelsummary(...)
5. └─modelsummary:::factory(...)
6. └─modelsummary (local) factory_fun(...)
7. ├─base::isTRUE(tools::file_ext(output_file) == "csv")
8. └─tools::file_ext(output_file)
9. ├─base::ifelse(...)
10. ├─base::grepl("^(.*[^.]+.*)[.]([[:alnum:]]+)$", basename(x))
11. │ └─base::is.factor(x)
12. └─base::basename(x)
[ FAIL 6 | WARN 0 | SKIP 13 | PASS 7 ]
Error:
! Test failures.
Execution halted
Flavor: r-devel-windows-x86_64
Version: 0.1.2.1
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
--- re-building 'adding_rows.Rmd' using rmarkdown
Quitting from adding_rows.Rmd:73-79 [unnamed-chunk-4]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `basename()`:
! a character vector argument expected
---
Backtrace:
▆
1. └─panelsummary::panelsummary_raw(...)
2. └─base::lapply(...)
3. └─panelsummary (local) FUN(X[[i]], ...)
4. └─modelsummary::modelsummary(...)
5. └─modelsummary:::factory(...)
6. └─modelsummary (local) factory_fun(...)
7. ├─base::isTRUE(tools::file_ext(output_file) == "csv")
8. └─tools::file_ext(output_file)
9. ├─base::ifelse(...)
10. ├─base::grepl("^(.*[^.]+.*)[.]([[:alnum:]]+)$", basename(x))
11. │ └─base::is.factor(x)
12. └─base::basename(x)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'adding_rows.Rmd' failed with diagnostics:
a character vector argument expected
--- failed re-building 'adding_rows.Rmd'
--- re-building 'panelsummary.Rmd' using rmarkdown
Quitting from panelsummary.Rmd:52-56 [unnamed-chunk-4]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `basename()`:
! a character vector argument expected
---
Backtrace:
▆
1. └─panelsummary::panelsummary(...)
2. └─base::lapply(...)
3. └─panelsummary (local) FUN(X[[i]], ...)
4. └─modelsummary::modelsummary(...)
5. └─modelsummary:::factory(...)
6. └─modelsummary (local) factory_fun(...)
7. ├─base::isTRUE(tools::file_ext(output_file) == "csv")
8. └─tools::file_ext(output_file)
9. ├─base::ifelse(...)
10. ├─base::grepl("^(.*[^.]+.*)[.]([[:alnum:]]+)$", basename(x))
11. │ └─base::is.factor(x)
12. └─base::basename(x)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'panelsummary.Rmd' failed with diagnostics:
a character vector argument expected
--- failed re-building 'panelsummary.Rmd'
--- re-building 'with_fixest.Rmd' using rmarkdown
Quitting from with_fixest.Rmd:60-66 [unnamed-chunk-4]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `basename()`:
! a character vector argument expected
---
Backtrace:
▆
1. ├─kableExtra::kable_classic(...)
2. │ └─kableExtra:::kable_light(...)
3. │ └─kableExtra::kable_styling(...)
4. └─panelsummary::panelsummary(...)
5. └─base::lapply(...)
6. └─panelsummary (local) FUN(X[[i]], ...)
7. └─modelsummary::modelsummary(...)
8. └─modelsummary:::factory(...)
9. └─modelsummary (local) factory_fun(...)
10. ├─base::isTRUE(tools::file_ext(output_file) == "csv")
11. └─tools::file_ext(output_file)
12. ├─base::ifelse(...)
13. ├─base::grepl("^(.*[^.]+.*)[.]([[:alnum:]]+)$", basename(x))
14. │ └─base::is.factor(x)
15. └─base::basename(x)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'with_fixest.Rmd' failed with diagnostics:
a character vector argument expected
--- failed re-building 'with_fixest.Rmd'
SUMMARY: processing the following files failed:
'adding_rows.Rmd' 'panelsummary.Rmd' 'with_fixest.Rmd'
Error: Vignette re-building failed.
Execution halted
Flavor: r-devel-windows-x86_64
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