CRAN Package Check Results for Maintainer ‘Joshua F. Wiley <jwiley.psych at gmail.com>’

Last updated on 2025-12-28 01:49:12 CET.

Package	ERROR	WARN	OK
brmsmargins		4	9
extraoperators			13
JWileymisc	4		9
multilevelTools	1		12
pscore			13

Package brmsmargins

Current CRAN status: WARN: 4, OK: 9

Version: 0.2.1
Check: whether package can be installed
Result: WARN Found the following significant warnings: integratere.cpp:78:20: warning: explicitly assigning value of variable of type 'arma::mat' (aka 'Mat<double>') to itself [-Wself-assign-overloaded] See ‘/Volumes/Builds/packages/big-sur-arm64/results/4.5/brmsmargins.Rcheck/00install.out’ for details. * used C++ compiler: ‘Apple clang version 14.0.0 (clang-1400.0.29.202)’ * used SDK: ‘MacOSX11.3.sdk’ Flavor: r-release-macos-arm64

Version: 0.2.1
Check: whether package can be installed
Result: WARN Found the following significant warnings: integratere.cpp:78:20: warning: explicitly assigning value of variable of type 'arma::mat' (aka 'Mat<double>') to itself [-Wself-assign-overloaded] See ‘/Volumes/Builds/packages/big-sur-x86_64/results/4.5/brmsmargins.Rcheck/00install.out’ for details. * used C++ compiler: ‘Apple clang version 14.0.3 (clang-1403.0.22.14.1)’ * used SDK: ‘MacOSX11.3.sdk’ Flavor: r-release-macos-x86_64

Version: 0.2.1
Check: whether package can be installed
Result: WARN Found the following significant warnings: integratere.cpp:78:20: warning: explicitly assigning value of variable of type 'arma::mat' (aka 'Mat<double>') to itself [-Wself-assign-overloaded] See ‘/Volumes/Builds/packages/big-sur-arm64/results/4.4/brmsmargins.Rcheck/00install.out’ for details. * used C++ compiler: ‘Apple clang version 14.0.0 (clang-1400.0.29.202)’ * used SDK: ‘MacOSX11.3.sdk’ Flavor: r-oldrel-macos-arm64

Version: 0.2.1
Check: installed package size
Result: NOTE installed size is 5.7Mb sub-directories of 1Mb or more: doc 2.8Mb libs 2.7Mb Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64

Version: 0.2.1
Check: whether package can be installed
Result: WARN Found the following significant warnings: integratere.cpp:78:20: warning: explicitly assigning value of variable of type 'arma::mat' (aka 'Mat<double>') to itself [-Wself-assign-overloaded] See ‘/Volumes/Builds/packages/big-sur-x86_64/results/4.4/brmsmargins.Rcheck/00install.out’ for details. * used C++ compiler: ‘Apple clang version 14.0.3 (clang-1403.0.22.14.1)’ * used SDK: ‘MacOSX11.3.sdk’ Flavor: r-oldrel-macos-x86_64

Package extraoperators

Current CRAN status: OK: 13

Package JWileymisc

Current CRAN status: ERROR: 4, OK: 9

Version: 1.4.4
Check: examples
Result: ERROR Running examples in 'JWileymisc-Ex.R' failed The error most likely occurred in: > ### Name: APAStyler.modelTest.vglm > ### Title: APAStyler method for model tests from a vglm multinomial model > ### Aliases: APAStyler.modelTest.vglm > > ### ** Examples > > mtcars$cyl <- factor(mtcars$cyl) > m <- VGAM::vglm(cyl ~ qsec, + family = VGAM::multinomial(), data = mtcars) > mt <- modelTest(m) > > APAStyler(mt) Error in `[.data.table`(FE, , `:=`(Count, .N), by = Term) : attempt access index 6/6 in VECTOR_ELT Calls: APAStyler -> APAStyler.modelTest.vglm -> [ -> [.data.table Execution halted Flavor: r-devel-windows-x86_64

Version: 1.4.4
Check: tests
Result: ERROR Running 'testthat.R' [26s] Running the tests in 'tests/testthat.R' failed. Complete output: > library(testthat) > test_check("JWileymisc") Loading required package: JWileymisc Saving _problems/test-APAStyler-36.R $`1` $`2` attr(,"class") [1] "list" "ggarrange" Saving _problems/test-modelTest-104.R Saving _problems/test-modelTest-116.R Loading required namespace: GPArotation [ FAIL 3 | WARN 1 | SKIP 1 | PASS 413 ] ══ Skipped tests (1) ═══════════════════════════════════════════════════════════ • On CRAN (1): 'test-distributions.R:75:3' ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test-APAStyler.R:36:3'): APAStyler works with vglm model tests ────── Error in ``[.data.table`(FE, , `:=`(Count, .N), by = Term)`: attempt access index 6/6 in VECTOR_ELT Backtrace: ▆ 1. ├─JWileymisc::APAStyler(mt, print = FALSE) at test-APAStyler.R:36:3 2. └─JWileymisc:::APAStyler.modelTest.vglm(mt, print = FALSE) 3. ├─FE[, `:=`(Count, .N), by = Term] 4. └─data.table:::`[.data.table`(FE, , `:=`(Count, .N), by = Term) ── Error ('test-modelTest.R:104:3'): modelTest works with vglm objects. ──────── Error in ``[.data.table`(FE, , `:=`(Count, .N), by = Term)`: attempt access index 6/6 in VECTOR_ELT Backtrace: ▆ 1. ├─testthat::expect_s3_class(APAStyler(mt), "data.table") at test-modelTest.R:104:3 2. │ └─testthat::quasi_label(enquo(object)) 3. │ └─rlang::eval_bare(expr, quo_get_env(quo)) 4. ├─JWileymisc::APAStyler(mt) 5. └─JWileymisc:::APAStyler.modelTest.vglm(mt) 6. ├─FE[, `:=`(Count, .N), by = Term] 7. └─data.table:::`[.data.table`(FE, , `:=`(Count, .N), by = Term) ── Error ('test-modelTest.R:116:3'): modelTest works with vglm objects with multiple predictors. ── Error in ``[.data.table`(FE, , `:=`(Count, .N), by = Term)`: attempt access index 6/6 in VECTOR_ELT Backtrace: ▆ 1. ├─testthat::expect_s3_class(APAStyler(mt), "data.table") at test-modelTest.R:116:3 2. │ └─testthat::quasi_label(enquo(object)) 3. │ └─rlang::eval_bare(expr, quo_get_env(quo)) 4. ├─JWileymisc::APAStyler(mt) 5. └─JWileymisc:::APAStyler.modelTest.vglm(mt) 6. ├─FE[, `:=`(Count, .N), by = Term] 7. └─data.table:::`[.data.table`(FE, , `:=`(Count, .N), by = Term) [ FAIL 3 | WARN 1 | SKIP 1 | PASS 413 ] Error: ! Test failures. Execution halted Flavor: r-devel-windows-x86_64

Version: 1.4.4
Check: tests
Result: ERROR Running ‘testthat.R’ [32s/44s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > library(testthat) > test_check("JWileymisc") Loading required package: JWileymisc $`1` $`2` attr(,"class") [1] "list" "ggarrange" Saving _problems/test-descriptives-helpers-24.R Loading required namespace: GPArotation [ FAIL 1 | WARN 4 | SKIP 1 | PASS 418 ] ══ Skipped tests (1) ═══════════════════════════════════════════════════════════ • On CRAN (1): 'test-distributions.R:75:3' ══ Failed tests ════════════════════════════════════════════════════════════════ ── Failure ('test-descriptives-helpers.R:22:5'): .stylepairedwilcox works ────── Expected `res` to equal "Wilcoxon Paired V = 54.00, p = .004". Differences: `actual`: "Wilcoxon Paired V = 45.00, p = .009" `expected`: "Wilcoxon Paired V = 54.00, p = .004" [ FAIL 1 | WARN 4 | SKIP 1 | PASS 418 ] Error: ! Test failures. Execution halted Flavor: r-patched-linux-x86_64

Version: 1.4.4
Check: tests
Result: ERROR Running ‘testthat.R’ [32s/42s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > library(testthat) > test_check("JWileymisc") Loading required package: JWileymisc $`1` $`2` attr(,"class") [1] "list" "ggarrange" Saving _problems/test-descriptives-helpers-24.R Loading required namespace: GPArotation [ FAIL 1 | WARN 4 | SKIP 1 | PASS 418 ] ══ Skipped tests (1) ═══════════════════════════════════════════════════════════ • On CRAN (1): 'test-distributions.R:75:3' ══ Failed tests ════════════════════════════════════════════════════════════════ ── Failure ('test-descriptives-helpers.R:22:5'): .stylepairedwilcox works ────── Expected `res` to equal "Wilcoxon Paired V = 54.00, p = .004". Differences: `actual`: "Wilcoxon Paired V = 45.00, p = .009" `expected`: "Wilcoxon Paired V = 54.00, p = .004" [ FAIL 1 | WARN 4 | SKIP 1 | PASS 418 ] Error: ! Test failures. Execution halted Flavor: r-release-linux-x86_64

Version: 1.4.4
Check: tests
Result: ERROR Running 'testthat.R' [25s] Running the tests in 'tests/testthat.R' failed. Complete output: > library(testthat) > test_check("JWileymisc") Loading required package: JWileymisc $`1` $`2` attr(,"class") [1] "list" "ggarrange" Saving _problems/test-descriptives-helpers-24.R Loading required namespace: GPArotation [ FAIL 1 | WARN 4 | SKIP 1 | PASS 418 ] ══ Skipped tests (1) ═══════════════════════════════════════════════════════════ • On CRAN (1): 'test-distributions.R:75:3' ══ Failed tests ════════════════════════════════════════════════════════════════ ── Failure ('test-descriptives-helpers.R:22:5'): .stylepairedwilcox works ────── Expected `res` to equal "Wilcoxon Paired V = 54.00, p = .004". Differences: `actual`: "Wilcoxon Paired V = 45.00, p = .009" `expected`: "Wilcoxon Paired V = 54.00, p = .004" [ FAIL 1 | WARN 4 | SKIP 1 | PASS 418 ] Error: ! Test failures. Execution halted Flavor: r-release-windows-x86_64

Package multilevelTools

Current CRAN status: ERROR: 1, OK: 12

Version: 0.2.1
Check: examples
Result: ERROR Running examples in 'multilevelTools-Ex.R' failed The error most likely occurred in: > ### Name: evaluateLags > ### Title: Create lag variables and evaluate models with different number > ### of lags > ### Aliases: evaluateLags > > ### ** Examples > > ## these examples are slow to run > data(aces_daily, package = "JWileymisc") > > evaluateLags( + "NegAff ~ Female + Age + BornAUS + (1 | UserID)", + "STRESS", + 4L, + "UserID", + aces_daily) Error in `[.data.table`(data, , `:=`((lags), lapply(1:nlags, function(i) lagk(get(lagvar), : attempt access index 19/19 in VECTOR_ELT Calls: evaluateLags -> [ -> [.data.table Execution halted Flavor: r-devel-windows-x86_64

Version: 0.2.1
Check: tests
Result: ERROR Running 'testthat.R' [8s] Running the tests in 'tests/testthat.R' failed. Complete output: > library(testthat) > library(multilevelTools) > library(JWileymisc) > > test_check("multilevelTools") Saving _problems/test-descriptives-2.R Saving _problems/test-descriptives-19.R [ FAIL 2 | WARN 0 | SKIP 19 | PASS 45 ] ══ Skipped tests (19) ══════════════════════════════════════════════════════════ • On CRAN (19): 'test-diagnostics.R:2:3', 'test-diagnostics.R:14:3', 'test-diagnostics.R:31:3', 'test-diagnostics.R:50:3', 'test-diagnostics.R:73:3', 'test-diagnostics.R:85:3', 'test-diagnostics.R:100:3', 'test-diagnostics.R:115:3', 'test-diagnostics.R:130:3', 'test-models.R:2:3', 'test-models.R:36:3', 'test-models.R:48:3', 'test-models.R:72:3', 'test-models.R:98:3', 'test-models.R:133:3', 'test-models.R:186:3', 'test-plotting.R:2:3', 'test-plotting.R:22:3', 'test-styler.R:2:3' ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test-descriptives.R:2:3'): meanDecompose works with one grouping factor ── Error in ``[.data.table`(data, , `:=`((vname), mean(get(vres), na.rm = TRUE)), by = c(v[2:i]))`: attempt access index 3/3 in VECTOR_ELT Backtrace: ▆ 1. └─multilevelTools::meanDecompose(mpg ~ cyl, data = mtcars) at test-descriptives.R:2:3 2. ├─data[, `:=`((vname), mean(get(vres), na.rm = TRUE)), by = c(v[2:i])] 3. └─data.table:::`[.data.table`(...) ── Error ('test-descriptives.R:19:3'): meanDecompose works with two grouping factors ── Error in ``[.data.table`(data, , `:=`((vname), mean(get(vres), na.rm = TRUE)), by = c(v[2:i]))`: attempt access index 4/4 in VECTOR_ELT Backtrace: ▆ 1. └─multilevelTools::meanDecompose(mpg ~ vs + cyl, data = mtcars) at test-descriptives.R:19:3 2. ├─data[, `:=`((vname), mean(get(vres), na.rm = TRUE)), by = c(v[2:i])] 3. └─data.table:::`[.data.table`(...) [ FAIL 2 | WARN 0 | SKIP 19 | PASS 45 ] Error: ! Test failures. Execution halted Flavor: r-devel-windows-x86_64

Version: 0.2.1
Check: re-building of vignette outputs
Result: ERROR Error(s) in re-building vignettes: --- re-building 'lmer-vignette.Rmd' using rmarkdown Quitting from lmer-vignette.Rmd:178-191 [unnamed-chunk-6] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ <error/rlang_error> Error in `[.data.table`: ! attempt access index 3/3 in VECTOR_ELT --- Backtrace: ▆ 1. └─multilevelTools::meanDecompose(NegAff ~ UserID, data = aces_daily) 2. ├─data[, `:=`((vname), mean(get(vres), na.rm = TRUE)), by = c(v[2:i])] 3. └─data.table:::`[.data.table`(...) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'lmer-vignette.Rmd' failed with diagnostics: attempt access index 3/3 in VECTOR_ELT --- failed re-building 'lmer-vignette.Rmd' SUMMARY: processing the following file failed: 'lmer-vignette.Rmd' Error: Vignette re-building failed. Execution halted Flavor: r-devel-windows-x86_64

Package pscore

Current CRAN status: OK: 13