CRAN Package Check Results for Maintainer ‘Johann Gagnon-Bartsch <johanngb at umich.edu>’

Last updated on 2025-04-17 16:51:37 CEST.

Package FAIL NOTE OK
cpt 13
ruv 1 12

Package cpt

Current CRAN status: OK: 13

Package ruv

Current CRAN status: FAIL: 1, NOTE: 12

Version: 0.9.7.1
Check: Rd files
Result: NOTE checkRd: (-1) RUVIII.Rd:51: Lost braces 51 | If code{return.info} is \code{TRUE}, a list is returned that contains: | ^ Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64

Version: 0.9.7.1
Check: PDF version of manual
Result: FAIL Check process probably crashed or hung up for 20 minutes ... killed Most likely this happened in the example checks (?), if not, ignore the following last lines of example output: > beta = matrix(rnorm(p*n), p, n) > beta[,ctl] = 0 > W = matrix(rnorm(m*k),m,k) > alpha = matrix(rnorm(k*n),k,n) > epsilon = matrix(rnorm(m*n),m,n) > Y = X%*%beta + W%*%alpha + epsilon > > ## Run RUV-inv > fit = RUVinv(Y, X, ctl) > > ## Get adjusted variances and p-values > fit = variance_adjust(fit) > > > > ### * <FOOTER> > ### > cleanEx() > options(digits = 7L) > base::cat("Time elapsed: ", proc.time() - base::get("ptime", pos = 'CheckExEnv'),"\n") Time elapsed: 4.01 0.69 4.7 NA NA > grDevices::dev.off() null device 1 > ### > ### Local variables: *** > ### mode: outline-minor *** > ### outline-regexp: "\\(> \\)?### [*]+" *** > ### End: *** > quit('no') ======== End of example output (where/before crash/hang up occured ?) ======== Flavor: r-release-windows-x86_64

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