Last updated on 2026-03-10 19:50:22 CET.
| Package | ERROR | OK |
|---|---|---|
| chemCal | 14 | |
| mkin | 2 | 12 |
Current CRAN status: OK: 14
Current CRAN status: ERROR: 2, OK: 12
Version: 1.2.10
Flags: --no-vignettes
Check: examples
Result: ERROR
Running examples in 'mkin-Ex.R' failed
The error most likely occurred in:
> ### Name: [.mmkin
> ### Title: Subsetting method for mmkin objects
> ### Aliases: [.mmkin
>
> ### ** Examples
>
>
> # Only use one core, to pass R CMD check --as-cran
> fits <- mmkin(c("SFO", "FOMC"), list(B = FOCUS_2006_B, C = FOCUS_2006_C),
+ cores = 1, quiet = TRUE)
Flavor: r-devel-windows-x86_64
Version: 1.2.10
Flags: --no-vignettes
Check: tests
Result: ERROR
Running 'testthat.R' [230s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
> library(testthat)
> library(mkin)
>
> test_check("mkin")
Error in `source_dir()`:
! Failed to evaluate './setup_script.R'.
Caused by error in `unserialize()`:
! error reading from connection
Backtrace:
▆
1. ├─testthat::test_check("mkin")
2. │ └─testthat::test_dir(...)
3. │ └─testthat:::test_files(...)
4. │ └─testthat:::test_files_serial(...)
5. │ └─testthat:::test_files_setup_state(...)
6. │ └─testthat::source_test_setup(".", env)
7. │ └─testthat::source_dir(path, "^setup.*\\.[rR]$", env = env, wrap = FALSE)
8. │ └─base::lapply(...)
9. │ └─testthat (local) FUN(X[[i]], ...)
10. │ └─testthat::source_file(...)
11. │ ├─base::withCallingHandlers(...)
12. │ └─base::eval(exprs, env)
13. │ └─base::eval(exprs, env)
14. │ ├─base::suppressWarnings(...) at ./setup_script.R:30:1
15. │ │ └─base::withCallingHandlers(...)
16. │ └─mkin::mmkin(...)
17. │ ├─base::system.time(...)
18. │ └─parallel::parLapply(cluster, as.list(1:n.fits), fit_function)
19. │ ├─base::do.call(...)
20. │ └─parallel::clusterApply(...)
21. │ └─parallel:::staticClusterApply(cl, fun, length(x), argfun)
22. │ └─base::lapply(cl[1:jobs], recvResult)
23. │ └─parallel (local) FUN(X[[i]], ...)
24. │ ├─parallel::recvData(con)
25. │ └─parallel:::recvData.SOCKnode(con)
26. │ └─base::unserialize(node$con)
27. └─base::.handleSimpleError(...)
28. └─testthat (local) h(simpleError(msg, call))
29. └─cli::cli_abort(...)
30. └─rlang::abort(...)
Timing stopped at: 0.21 0.03 130.2
Flavor: r-devel-windows-x86_64
Version: 1.2.10
Flags: --no-vignettes
Check: examples
Result: ERROR
Running examples in 'mkin-Ex.R' failed
The error most likely occurred in:
> ### Name: add_err
> ### Title: Add normally distributed errors to simulated kinetic degradation
> ### data
> ### Aliases: add_err
>
> ### ** Examples
>
>
> # The kinetic model
> m_SFO_SFO <- mkinmod(parent = mkinsub("SFO", "M1"),
+ M1 = mkinsub("SFO"), use_of_ff = "max")
ERROR(s) during compilation: source code errors or compiler configuration errors!
make cmd is
make -f "D:/RCompile/recent/R-4.5.2p/etc/x64/Makeconf" -f "D:/RCompile/recent/R-4.5.2p/share/make/winshlib.mk" SHLIB="file3bc8661856e5.dll" WIN=64 TCLBIN= OBJECTS="file3bc8661856e5.o"
make would use
make[1]: Entering directory '/d/temp/2026_03_06_11_10_10_4045/RtmpAdjw8K'
gcc -I"D:/RCompile/recent/R-4.5.2p/include" -DNDEBUG -DR_NO_REMAP -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -pedantic -Wstrict-prototypes -O2 -Wall -std=gnu2x -mfpmath=sse -msse2 -mstackrealign -c file3bc8661856e5.c -o file3bc8661856e5.o
if test "zfile3bc8661856e5.o" != "z"; then \
if test -e "file3bc8661856e5-win.def"; then \
echo gcc -shared -s -static-libgcc -o file3bc8661856e5.dll file3bc8661856e5-win.def file3bc8661856e5.o -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib/x64" -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib" -L"D:/RCompile/recent/R-4.5.2p/bin/x64" -lR ; \
gcc -shared -s -static-libgcc -o file3bc8661856e5.dll file3bc8661856e5-win.def file3bc8661856e5.o -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib/x64" -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib" -L"D:/RCompile/recent/R-4.5.2p/bin/x64" -lR ; \
else \
echo EXPORTS > tmp.def; \
nm file3bc8661856e5.o | sed -n 's/^.* [BCDRT] / /p' | sed -e '/[.]refptr[.]/d' -e '/[.]weak[.]/d' | sed 's/[^ ][^ ]*/"&"/g' >> tmp.def; \
echo gcc -shared -s -static-libgcc -o file3bc8661856e5.dll tmp.def file3bc8661856e5.o -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib/x64" -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib" -L"D:/RCompile/recent/R-4.5.2p/bin/x64" -lR ; \
gcc -shared -s -static-libgcc -o file3bc8661856e5.dll tmp.def file3bc8661856e5.o -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib/x64" -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib" -L"D:/RCompile/recent/R-4.5.2p/bin/x64" -lR ; \
rm -f tmp.def; \
fi \
fi
make[1]: Leaving directory '/d/temp/2026_03_06_11_10_10_4045/RtmpAdjw8K'
Program source:
1: #include <R.h>
2:
3:
4: static double parms [3];
5: #define k_parent parms[0]
6: #define f_parent_to_M1 parms[1]
7: #define k_M1 parms[2]
8:
9: void initpar(void (* odeparms)(int *, double *)) {
10: int N = 3;
11: odeparms(&N, parms);
12: }
13:
14:
15: void diffs ( int * n, double * t, double * y, double * f, double * rpar, int * ipar ) {
16:
17: f[0] = - k_parent * y[0];
18: f[1] = + f_parent_to_M1 * k_parent * y[0] - k_M1 * y[1];
19: }
Compilation ERROR, function(s)/method(s) not created!
>
> # Generate a prediction for a specific set of parameters
> sampling_times = c(0, 1, 3, 7, 14, 28, 60, 90, 120)
>
> # This is the prediction used for the "Type 2 datasets" on the Piacenza poster
> # from 2015
> d_SFO_SFO <- mkinpredict(m_SFO_SFO,
+ c(k_parent = 0.1, f_parent_to_M1 = 0.5,
+ k_M1 = log(2)/1000),
+ c(parent = 100, M1 = 0),
+ sampling_times)
Error in checkInput(y, times, func, rtol, atol, jacfunc, tcrit, hmin, :
specify the name of the dll or shared library where func can be found (without extension)
Calls: mkinpredict -> mkinpredict.mkinmod -> <Anonymous> -> checkInput
Execution halted
Flavor: r-release-windows-x86_64
Version: 1.2.10
Flags: --no-vignettes
Check: tests
Result: ERROR
Running 'testthat.R' [169s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
> library(testthat)
> library(mkin)
>
> test_check("mkin")
ERROR(s) during compilation: source code errors or compiler configuration errors!
make cmd is
make -f "D:/RCompile/recent/R-4.5.2p/etc/x64/Makeconf" -f "D:/RCompile/recent/R-4.5.2p/share/make/winshlib.mk" SHLIB="filed8dccd65344.dll" WIN=64 TCLBIN= OBJECTS="filed8dccd65344.o"
make would use
make[1]: Entering directory '/d/temp/2026_03_06_11_10_10_4045/Rtmpwn4Wwh'
gcc -I"D:/RCompile/recent/R-4.5.2p/include" -DNDEBUG -DR_NO_REMAP -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -pedantic -Wstrict-prototypes -O2 -Wall -std=gnu2x -mfpmath=sse -msse2 -mstackrealign -c filed8dccd65344.c -o filed8dccd65344.o
if test "zfiled8dccd65344.o" != "z"; then \
if test -e "filed8dccd65344-win.def"; then \
echo gcc -shared -s -static-libgcc -o filed8dccd65344.dll filed8dccd65344-win.def filed8dccd65344.o -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib/x64" -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib" -L"D:/RCompile/recent/R-4.5.2p/bin/x64" -lR ; \
gcc -shared -s -static-libgcc -o filed8dccd65344.dll filed8dccd65344-win.def filed8dccd65344.o -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib/x64" -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib" -L"D:/RCompile/recent/R-4.5.2p/bin/x64" -lR ; \
else \
echo EXPORTS > tmp.def; \
nm filed8dccd65344.o | sed -n 's/^.* [BCDRT] / /p' | sed -e '/[.]refptr[.]/d' -e '/[.]weak[.]/d' | sed 's/[^ ][^ ]*/"&"/g' >> tmp.def; \
echo gcc -shared -s -static-libgcc -o filed8dccd65344.dll tmp.def filed8dccd65344.o -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib/x64" -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib" -L"D:/RCompile/recent/R-4.5.2p/bin/x64" -lR ; \
gcc -shared -s -static-libgcc -o filed8dccd65344.dll tmp.def filed8dccd65344.o -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib/x64" -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib" -L"D:/RCompile/recent/R-4.5.2p/bin/x64" -lR ; \
rm -f tmp.def; \
fi \
fi
make[1]: Leaving directory '/d/temp/2026_03_06_11_10_10_4045/Rtmpwn4Wwh'
Program source:
1: #include <R.h>
2:
3:
4: static double parms [3];
5: #define k_parent_sink parms[0]
6: #define k_parent_m1 parms[1]
7: #define k_m1_sink parms[2]
8:
9: void initpar(void (* odeparms)(int *, double *)) {
10: int N = 3;
11: odeparms(&N, parms);
12: }
13:
14:
15: void diffs ( int * n, double * t, double * y, double * f, double * rpar, int * ipar ) {
16:
17: f[0] = - k_parent_sink * y[0] - k_parent_m1 * y[0];
18: f[1] = + k_parent_m1 * y[0] - k_m1_sink * y[1];
19: }
Compilation ERROR, function(s)/method(s) not created!
ERROR(s) during compilation: source code errors or compiler configuration errors!
make cmd is
make -f "D:/RCompile/recent/R-4.5.2p/etc/x64/Makeconf" -f "D:/RCompile/recent/R-4.5.2p/share/make/winshlib.mk" SHLIB="filed8dc138713cb.dll" WIN=64 TCLBIN= OBJECTS="filed8dc138713cb.o"
make would use
make[1]: Entering directory '/d/temp/2026_03_06_11_10_10_4045/Rtmpwn4Wwh'
gcc -I"D:/RCompile/recent/R-4.5.2p/include" -DNDEBUG -DR_NO_REMAP -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -pedantic -Wstrict-prototypes -O2 -Wall -std=gnu2x -mfpmath=sse -msse2 -mstackrealign -c filed8dc138713cb.c -o filed8dc138713cb.o
if test "zfiled8dc138713cb.o" != "z"; then \
if test -e "filed8dc138713cb-win.def"; then \
echo gcc -shared -s -static-libgcc -o filed8dc138713cb.dll filed8dc138713cb-win.def filed8dc138713cb.o -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib/x64" -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib" -L"D:/RCompile/recent/R-4.5.2p/bin/x64" -lR ; \
gcc -shared -s -static-libgcc -o filed8dc138713cb.dll filed8dc138713cb-win.def filed8dc138713cb.o -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib/x64" -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib" -L"D:/RCompile/recent/R-4.5.2p/bin/x64" -lR ; \
else \
echo EXPORTS > tmp.def; \
nm filed8dc138713cb.o | sed -n 's/^.* [BCDRT] / /p' | sed -e '/[.]refptr[.]/d' -e '/[.]weak[.]/d' | sed 's/[^ ][^ ]*/"&"/g' >> tmp.def; \
echo gcc -shared -s -static-libgcc -o filed8dc138713cb.dll tmp.def filed8dc138713cb.o -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib/x64" -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib" -L"D:/RCompile/recent/R-4.5.2p/bin/x64" -lR ; \
gcc -shared -s -static-libgcc -o filed8dc138713cb.dll tmp.def filed8dc138713cb.o -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib/x64" -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib" -L"D:/RCompile/recent/R-4.5.2p/bin/x64" -lR ; \
rm -f tmp.def; \
fi \
fi
make[1]: Leaving directory '/d/temp/2026_03_06_11_10_10_4045/Rtmpwn4Wwh'
Program source:
1: #include <R.h>
2:
3:
4: static double parms [3];
5: #define k_parent parms[0]
6: #define f_parent_to_m1 parms[1]
7: #define k_m1 parms[2]
8:
9: void initpar(void (* odeparms)(int *, double *)) {
10: int N = 3;
11: odeparms(&N, parms);
12: }
13:
14:
15: void diffs ( int * n, double * t, double * y, double * f, double * rpar, int * ipar ) {
16:
17: f[0] = - k_parent * y[0];
18: f[1] = + f_parent_to_m1 * k_parent * y[0] - k_m1 * y[1];
19: }
Compilation ERROR, function(s)/method(s) not created!
ERROR(s) during compilation: source code errors or compiler configuration errors!
make cmd is
make -f "D:/RCompile/recent/R-4.5.2p/etc/x64/Makeconf" -f "D:/RCompile/recent/R-4.5.2p/share/make/winshlib.mk" SHLIB="filed8dc1cc43dba.dll" WIN=64 TCLBIN= OBJECTS="filed8dc1cc43dba.o"
make would use
make[1]: Entering directory '/d/temp/2026_03_06_11_10_10_4045/Rtmpwn4Wwh'
gcc -I"D:/RCompile/recent/R-4.5.2p/include" -DNDEBUG -DR_NO_REMAP -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -pedantic -Wstrict-prototypes -O2 -Wall -std=gnu2x -mfpmath=sse -msse2 -mstackrealign -c filed8dc1cc43dba.c -o filed8dc1cc43dba.o
if test "zfiled8dc1cc43dba.o" != "z"; then \
if test -e "filed8dc1cc43dba-win.def"; then \
echo gcc -shared -s -static-libgcc -o filed8dc1cc43dba.dll filed8dc1cc43dba-win.def filed8dc1cc43dba.o -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib/x64" -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib" -L"D:/RCompile/recent/R-4.5.2p/bin/x64" -lR ; \
gcc -shared -s -static-libgcc -o filed8dc1cc43dba.dll filed8dc1cc43dba-win.def filed8dc1cc43dba.o -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib/x64" -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib" -L"D:/RCompile/recent/R-4.5.2p/bin/x64" -lR ; \
else \
echo EXPORTS > tmp.def; \
nm filed8dc1cc43dba.o | sed -n 's/^.* [BCDRT] / /p' | sed -e '/[.]refptr[.]/d' -e '/[.]weak[.]/d' | sed 's/[^ ][^ ]*/"&"/g' >> tmp.def; \
echo gcc -shared -s -static-libgcc -o filed8dc1cc43dba.dll tmp.def filed8dc1cc43dba.o -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib/x64" -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib" -L"D:/RCompile/recent/R-4.5.2p/bin/x64" -lR ; \
gcc -shared -s -static-libgcc -o filed8dc1cc43dba.dll tmp.def filed8dc1cc43dba.o -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib/x64" -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib" -L"D:/RCompile/recent/R-4.5.2p/bin/x64" -lR ; \
rm -f tmp.def; \
fi \
fi
make[1]: Leaving directory '/d/temp/2026_03_06_11_10_10_4045/Rtmpwn4Wwh'
Program source:
1: #include <R.h>
2:
3:
4: static double parms [2];
5: #define k_parent parms[0]
6: #define k_m1 parms[1]
7:
8: void initpar(void (* odeparms)(int *, double *)) {
9: int N = 2;
10: odeparms(&N, parms);
11: }
12:
13:
14: void diffs ( int * n, double * t, double * y, double * f, double * rpar, int * ipar ) {
15:
16: f[0] = - k_parent * y[0];
17: f[1] = + k_parent * y[0] - k_m1 * y[1];
18: }
Compilation ERROR, function(s)/method(s) not created!
ERROR(s) during compilation: source code errors or compiler configuration errors!
make cmd is
make -f "D:/RCompile/recent/R-4.5.2p/etc/x64/Makeconf" -f "D:/RCompile/recent/R-4.5.2p/share/make/winshlib.mk" SHLIB="filed8dc5ba22241.dll" WIN=64 TCLBIN= OBJECTS="filed8dc5ba22241.o"
make would use
make[1]: Entering directory '/d/temp/2026_03_06_11_10_10_4045/Rtmpwn4Wwh'
gcc -I"D:/RCompile/recent/R-4.5.2p/include" -DNDEBUG -DR_NO_REMAP -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -pedantic -Wstrict-prototypes -O2 -Wall -std=gnu2x -mfpmath=sse -msse2 -mstackrealign -c filed8dc5ba22241.c -o filed8dc5ba22241.o
if test "zfiled8dc5ba22241.o" != "z"; then \
if test -e "filed8dc5ba22241-win.def"; then \
echo gcc -shared -s -static-libgcc -o filed8dc5ba22241.dll filed8dc5ba22241-win.def filed8dc5ba22241.o -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib/x64" -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib" -L"D:/RCompile/recent/R-4.5.2p/bin/x64" -lR ; \
gcc -shared -s -static-libgcc -o filed8dc5ba22241.dll filed8dc5ba22241-win.def filed8dc5ba22241.o -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib/x64" -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib" -L"D:/RCompile/recent/R-4.5.2p/bin/x64" -lR ; \
else \
echo EXPORTS > tmp.def; \
nm filed8dc5ba22241.o | sed -n 's/^.* [BCDRT] / /p' | sed -e '/[.]refptr[.]/d' -e '/[.]weak[.]/d' | sed 's/[^ ][^ ]*/"&"/g' >> tmp.def; \
echo gcc -shared -s -static-libgcc -o filed8dc5ba22241.dll tmp.def filed8dc5ba22241.o -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib/x64" -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib" -L"D:/RCompile/recent/R-4.5.2p/bin/x64" -lR ; \
gcc -shared -s -static-libgcc -o filed8dc5ba22241.dll tmp.def filed8dc5ba22241.o -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib/x64" -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib" -L"D:/RCompile/recent/R-4.5.2p/bin/x64" -lR ; \
rm -f tmp.def; \
fi \
fi
make[1]: Leaving directory '/d/temp/2026_03_06_11_10_10_4045/Rtmpwn4Wwh'
Program source:
1: #include <R.h>
2:
3:
4: static double parms [4];
5: #define alpha parms[0]
6: #define beta parms[1]
7: #define f_parent_to_m1 parms[2]
8: #define k_m1 parms[3]
9:
10: void initpar(void (* odeparms)(int *, double *)) {
11: int N = 4;
12: odeparms(&N, parms);
13: }
14:
15:
16: void diffs ( int * n, double * t, double * y, double * f, double * rpar, int * ipar ) {
17: double time = *t;
18:
19: f[0] = - (alpha/beta) * 1/((time/beta) + 1) * y[0];
20: f[1] = + f_parent_to_m1 * (alpha/beta) * 1/((time/beta) + 1) * y[0] - k_m1 * y[1];
21: }
Compilation ERROR, function(s)/method(s) not created!
ERROR(s) during compilation: source code errors or compiler configuration errors!
make cmd is
make -f "D:/RCompile/recent/R-4.5.2p/etc/x64/Makeconf" -f "D:/RCompile/recent/R-4.5.2p/share/make/winshlib.mk" SHLIB="filed8dc45532f7d.dll" WIN=64 TCLBIN= OBJECTS="filed8dc45532f7d.o"
make would use
make[1]: Entering directory '/d/temp/2026_03_06_11_10_10_4045/Rtmpwn4Wwh'
gcc -I"D:/RCompile/recent/R-4.5.2p/include" -DNDEBUG -DR_NO_REMAP -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -pedantic -Wstrict-prototypes -O2 -Wall -std=gnu2x -mfpmath=sse -msse2 -mstackrealign -c filed8dc45532f7d.c -o filed8dc45532f7d.o
if test "zfiled8dc45532f7d.o" != "z"; then \
if test -e "filed8dc45532f7d-win.def"; then \
echo gcc -shared -s -static-libgcc -o filed8dc45532f7d.dll filed8dc45532f7d-win.def filed8dc45532f7d.o -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib/x64" -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib" -L"D:/RCompile/recent/R-4.5.2p/bin/x64" -lR ; \
gcc -shared -s -static-libgcc -o filed8dc45532f7d.dll filed8dc45532f7d-win.def filed8dc45532f7d.o -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib/x64" -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib" -L"D:/RCompile/recent/R-4.5.2p/bin/x64" -lR ; \
else \
echo EXPORTS > tmp.def; \
nm filed8dc45532f7d.o | sed -n 's/^.* [BCDRT] / /p' | sed -e '/[.]refptr[.]/d' -e '/[.]weak[.]/d' | sed 's/[^ ][^ ]*/"&"/g' >> tmp.def; \
echo gcc -shared -s -static-libgcc -o filed8dc45532f7d.dll tmp.def filed8dc45532f7d.o -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib/x64" -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib" -L"D:/RCompile/recent/R-4.5.2p/bin/x64" -lR ; \
gcc -shared -s -static-libgcc -o filed8dc45532f7d.dll tmp.def filed8dc45532f7d.o -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib/x64" -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib" -L"D:/RCompile/recent/R-4.5.2p/bin/x64" -lR ; \
rm -f tmp.def; \
fi \
fi
make[1]: Leaving directory '/d/temp/2026_03_06_11_10_10_4045/Rtmpwn4Wwh'
Program source:
1: #include <R.h>
2:
3:
4: static double parms [5];
5: #define k1 parms[0]
6: #define k2 parms[1]
7: #define g parms[2]
8: #define f_parent_to_m1 parms[3]
9: #define k_m1 parms[4]
10:
11: void initpar(void (* odeparms)(int *, double *)) {
12: int N = 5;
13: odeparms(&N, parms);
14: }
15:
16:
17: void diffs ( int * n, double * t, double * y, double * f, double * rpar, int * ipar ) {
18: double time = *t;
19:
20: f[0] = - ((k1 * g * exp(-k1 * time) + k2 * (1 - g) * exp(-k2 * time)) / (g * exp(-k1 * time) + (1 - g) * exp(-k2 * time))) * y[0];
21: f[1] = + f_parent_to_m1 * ((k1 * g * exp(-k1 * time) + k2 * (1 - g) * exp(-k2 * time)) / (g * exp(-k1 * time) + (1 - g) * exp(-k2 * time))) * y[0] - k_m1 * y[1];
22: }
Compilation ERROR, function(s)/method(s) not created!
Error in is.loaded(initfunc, PACKAGE = dllname, type = "") :
invalid 'PACKAGE' argument
Flavor: r-release-windows-x86_64
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