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Last updated on 2026-04-17 11:54:24 CEST.
| Package | ERROR | NOTE | OK |
|---|---|---|---|
| codeCollection | 14 | ||
| cohorttools | 3 | 11 | |
| shinyPredict | 5 | 9 |
Current CRAN status: OK: 14
Current CRAN status: ERROR: 3, OK: 11
Version: 0.1.7
Check: examples
Result: ERROR
Running examples in ‘cohorttools-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: boxesLx
> ### Title: Boxes plot summarizing Lexis object
> ### Aliases: boxesLx
>
> ### ** Examples
>
> library(DiagrammeR)
> library(survival)
> library(Epi)
> library(mstate)
Attaching package: ‘mstate’
The following objects are masked from ‘package:Epi’:
absorbing, paths
> data(ebmt3)
> bmt <- Lexis(exit = list(tft = rfstime/365.25),
+ exit.status = factor(rfsstat, labels = c("Tx", "RD")),
+ data = ebmt3)
NOTE: entry.status has been set to "Tx" for all.
NOTE: entry is assumed to be 0 on the tft timescale.
> bmtr <- cutLexis(bmt, cut = bmt$prtime/365.25, precursor.states = "Tx",
+ new.state = "PR")
>
> summary(bmtr)
Transitions:
To
From Tx PR RD Records: Events: Risk time: Persons:
Tx 577 1169 458 2204 1627 2439.43 2204
PR 0 786 383 1169 383 3173.03 1169
Sum 577 1955 841 3373 2010 5612.46 2204
> kk<-boxesLx(bmtr)
Error in lv.1$Transitions[1:lv.len, " Persons:"] :
subscript out of bounds
Calls: boxesLx
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 0.1.7
Check: examples
Result: ERROR
Running examples in ‘cohorttools-Ex.R’ failed
The error most likely occurred in:
> ### Name: boxesLx
> ### Title: Boxes plot summarizing Lexis object
> ### Aliases: boxesLx
>
> ### ** Examples
>
> library(DiagrammeR)
> library(survival)
> library(Epi)
> library(mstate)
Attaching package: ‘mstate’
The following objects are masked from ‘package:Epi’:
absorbing, paths
> data(ebmt3)
> bmt <- Lexis(exit = list(tft = rfstime/365.25),
+ exit.status = factor(rfsstat, labels = c("Tx", "RD")),
+ data = ebmt3)
NOTE: entry.status has been set to "Tx" for all.
NOTE: entry is assumed to be 0 on the tft timescale.
> bmtr <- cutLexis(bmt, cut = bmt$prtime/365.25, precursor.states = "Tx",
+ new.state = "PR")
>
> summary(bmtr)
Transitions:
To
From Tx PR RD Records: Events: Risk time: Persons:
Tx 577 1169 458 2204 1627 2439.43 2204
PR 0 786 383 1169 383 3173.03 1169
Sum 577 1955 841 3373 2010 5612.46 2204
> kk<-boxesLx(bmtr)
Error in lv.1$Transitions[1:lv.len, " Persons:"] :
subscript out of bounds
Calls: boxesLx
Execution halted
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc
Current CRAN status: NOTE: 5, OK: 9
Version: 0.1.1
Check: CRAN incoming feasibility
Result: NOTE
Maintainer: ‘Jari Haukka <jari.haukka@helsinki.fi>’
No Authors@R field in DESCRIPTION.
Please add one, modifying
Authors@R: person(given = "Jari",
family = "Haukka",
role = c("aut", "cre"),
email = "jari.haukka@helsinki.fi")
as necessary.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc
Version: 0.1.1
Check: LazyData
Result: NOTE
'LazyData' is specified without a 'data' directory
Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64
These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.
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