CRAN Package Check Results for Maintainer ‘Italo Granato <italo.granato at gmail.com>’

Last updated on 2025-05-15 11:50:35 CEST.

Package	NOTE	OK
BGGE	3	10
snpReady	13

Package BGGE

Current CRAN status: NOTE: 3, OK: 10

Version: 0.6.5
Check: LazyData
Result: NOTE 'LazyData' is specified without a 'data' directory Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64

Package snpReady

Current CRAN status: NOTE: 13

Version: 0.9.6
Check: CRAN incoming feasibility
Result: NOTE Maintainer: ‘Italo Granato <italo.granato@gmail.com>’ File 'R/snpReady-internal.R' sets .Random.seed. This is usually neither needed nor wanted. Found the following \keyword or \concept entries which likely give several index terms: File ‘maize.hyb.Rd’: \keyword{datasets;} File ‘maize.line.Rd’: \keyword{datasets;} Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc

Version: 0.9.6
Check: Rd files
Result: NOTE checkRd: (-1) maize.line.Rd:9: Lost braces in \itemize; meant \describe ? checkRd: (-1) maize.line.Rd:10: Lost braces in \itemize; meant \describe ? checkRd: (-1) maize.line.Rd:11: Lost braces in \itemize; meant \describe ? checkRd: (-1) maize.line.Rd:12: Lost braces in \itemize; meant \describe ? checkRd: (-1) raw.data.Rd:26: Lost braces; missing escapes or markup? 26 | \item{call.rate}{\code{numeric}. Threshold for removing marker by missing genotype rate. SNP with \code{call rate} below threshold are removed from dataset. Must be between {0, 1}} | ^ checkRd: (-1) raw.data.Rd:28: Lost braces; missing escapes or markup? 28 | \item{maf}{Threshold for removing SNP by minor allele frequency. Must be between {0, 1}} | ^ Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64