CRAN Package Check Results for Maintainer ‘Fong Chun Chan <fongchunchan at gmail.com>’

Last updated on 2026-02-15 07:51:08 CET.

Package ERROR NOTE OK
cofeatureR 9 2 3

Package cofeatureR

Current CRAN status: ERROR: 9, NOTE: 2, OK: 3

Version: 1.1.1
Check: tests
Result: ERROR Running ‘testthat.R’ [2s/2s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > library(testthat) > library(cofeatureR) > > test_check("cofeatureR") Saving _problems/test_plot_cofeature_mat-23.R [ FAIL 1 | WARN 0 | SKIP 0 | PASS 0 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test_plot_cofeature_mat.R:23:5'): plot_cofeature_mat correctly adds tile borders ── <lifecycle_error_deprecated/defunctError/rlang_error/error/condition> Error: `mutate_()` was deprecated in dplyr 0.7.0 and is now defunct. ℹ Please use `mutate()` instead. ℹ See vignette('programming') for more help Backtrace: ▆ 1. └─cofeatureR::plot_cofeature_mat(in_df, tile.col = cur_border_col) at test_plot_cofeature_mat.R:23:5 2. └─dplyr::mutate_(in.df, .dots = setNames(list(mutate.call), "feature")) 3. └─dplyr:::lazy_defunct("mutate") 4. └─lifecycle::deprecate_stop(...) 5. └─lifecycle:::deprecate_stop0(msg) 6. └─rlang::cnd_signal(...) [ FAIL 1 | WARN 0 | SKIP 0 | PASS 0 ] Error: ! Test failures. Execution halted Flavors: r-devel-linux-x86_64-debian-clang, r-patched-linux-x86_64

Version: 1.1.1
Check: tests
Result: ERROR Running ‘testthat.R’ [1s/2s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > library(testthat) > library(cofeatureR) > > test_check("cofeatureR") Saving _problems/test_plot_cofeature_mat-23.R [ FAIL 1 | WARN 0 | SKIP 0 | PASS 0 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test_plot_cofeature_mat.R:23:5'): plot_cofeature_mat correctly adds tile borders ── <lifecycle_error_deprecated/defunctError/rlang_error/error/condition> Error: `mutate_()` was deprecated in dplyr 0.7.0 and is now defunct. ℹ Please use `mutate()` instead. ℹ See vignette('programming') for more help Backtrace: ▆ 1. └─cofeatureR::plot_cofeature_mat(in_df, tile.col = cur_border_col) at test_plot_cofeature_mat.R:23:5 2. └─dplyr::mutate_(in.df, .dots = setNames(list(mutate.call), "feature")) 3. └─dplyr:::lazy_defunct("mutate") 4. └─lifecycle::deprecate_stop(...) 5. └─lifecycle:::deprecate_stop0(msg) 6. └─rlang::cnd_signal(...) [ FAIL 1 | WARN 0 | SKIP 0 | PASS 0 ] Error: ! Test failures. Execution halted Flavors: r-devel-linux-x86_64-debian-gcc, r-release-linux-x86_64

Version: 1.1.1
Check: dependencies in R code
Result: NOTE Namespace in Imports field not imported from: ‘tibble’ All declared Imports should be used. Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc

Version: 1.1.1
Check: tests
Result: ERROR Running ‘testthat.R’ Running the tests in ‘tests/testthat.R’ failed. Complete output: > library(testthat) > library(cofeatureR) > > test_check("cofeatureR") Saving _problems/test_plot_cofeature_mat-23.R [ FAIL 1 | WARN 0 | SKIP 0 | PASS 0 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test_plot_cofeature_mat.R:23:5'): plot_cofeature_mat correctly adds tile borders ── <lifecycle_error_deprecated/defunctError/rlang_error/error/condition> Error: `mutate_()` was deprecated in dplyr 0.7.0 and is now defunct. ℹ Please use `mutate()` instead. ℹ See vignette('programming') for more help Backtrace: ▆ 1. └─cofeatureR::plot_cofeature_mat(in_df, tile.col = cur_border_col) at test_plot_cofeature_mat.R:23:5 2. └─dplyr::mutate_(in.df, .dots = setNames(list(mutate.call), "feature")) 3. └─dplyr:::lazy_defunct("mutate") 4. └─lifecycle::deprecate_stop(...) 5. └─lifecycle:::deprecate_stop0(msg) 6. └─rlang::cnd_signal(...) [ FAIL 1 | WARN 0 | SKIP 0 | PASS 0 ] Error: ! Test failures. Execution halted Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc

Version: 1.1.1
Check: tests
Result: ERROR Running 'testthat.R' [1s] Running the tests in 'tests/testthat.R' failed. Complete output: > library(testthat) > library(cofeatureR) > > test_check("cofeatureR") Saving _problems/test_plot_cofeature_mat-23.R [ FAIL 1 | WARN 0 | SKIP 0 | PASS 0 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test_plot_cofeature_mat.R:23:5'): plot_cofeature_mat correctly adds tile borders ── <lifecycle_error_deprecated/defunctError/rlang_error/error/condition> Error: `mutate_()` was deprecated in dplyr 0.7.0 and is now defunct. ℹ Please use `mutate()` instead. ℹ See vignette('programming') for more help Backtrace: ▆ 1. └─cofeatureR::plot_cofeature_mat(in_df, tile.col = cur_border_col) at test_plot_cofeature_mat.R:23:5 2. └─dplyr::mutate_(in.df, .dots = setNames(list(mutate.call), "feature")) 3. └─dplyr:::lazy_defunct("mutate") 4. └─lifecycle::deprecate_stop(...) 5. └─lifecycle:::deprecate_stop0(msg) 6. └─rlang::cnd_signal(...) [ FAIL 1 | WARN 0 | SKIP 0 | PASS 0 ] Error: ! Test failures. Execution halted Flavors: r-devel-windows-x86_64, r-release-windows-x86_64

Version: 1.1.1
Check: LazyData
Result: NOTE 'LazyData' is specified without a 'data' directory Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64

Version: 1.1.1
Check: tests
Result: ERROR Running 'testthat.R' [2s] Running the tests in 'tests/testthat.R' failed. Complete output: > library(testthat) > library(cofeatureR) > > test_check("cofeatureR") Saving _problems/test_plot_cofeature_mat-23.R [ FAIL 1 | WARN 0 | SKIP 0 | PASS 0 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test_plot_cofeature_mat.R:23:5'): plot_cofeature_mat correctly adds tile borders ── <lifecycle_error_deprecated/defunctError/rlang_error/error/condition> Error: `mutate_()` was deprecated in dplyr 0.7.0 and is now defunct. ℹ Please use `mutate()` instead. ℹ See vignette('programming') for more help Backtrace: ▆ 1. └─cofeatureR::plot_cofeature_mat(in_df, tile.col = cur_border_col) at test_plot_cofeature_mat.R:23:5 2. └─dplyr::mutate_(in.df, .dots = setNames(list(mutate.call), "feature")) 3. └─dplyr:::lazy_defunct("mutate") 4. └─lifecycle::deprecate_stop(...) 5. └─lifecycle:::deprecate_stop0(msg) 6. └─rlang::cnd_signal(...) [ FAIL 1 | WARN 0 | SKIP 0 | PASS 0 ] Error: ! Test failures. Execution halted Flavor: r-oldrel-windows-x86_64

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